RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 ASS1P00966 412 aaKnown RBP4.88□□□□□ -1.63
GYPB-212ENST00000511198 APOEP02649 317 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 LYNP07948 512 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 PABPC4LP0CB38 370 aaKnown RBP4.88□□□□□ -1.63
GYPB-212ENST00000511198 ACP5P13686 325 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 F3P13726 295 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 CYP11B1P15538 503 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 XRCC1P18887 633 aaPredicted RBP4.88□□□□□ -1.63
GYPB-212ENST00000511198 GCAP28676 217 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 CRABP2P29373 138 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 GTF2H1P32780 548 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 SUOXP51687 545 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 NR0B1P51843 470 aaKnown RBP4.88□□□□□ -1.63
GYPB-212ENST00000511198 CDH4P55283 916 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 GEMIN4P57678 1058 aaKnown RBP4.88□□□□□ -1.63
GYPB-212ENST00000511198 CYP24A1Q07973 514 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 ITGA9Q13797 1035 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 VEZF1Q14119 521 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 KIR2DS5Q14953 304 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 SLC25A35Q3KQZ1 300 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 ACSBG2Q5FVE4 666 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 C1orf189Q5VU69 101 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 RETSATQ6NUM9 610 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 C8orf82Q6P1X6 216 aaPredicted RBP4.88□□□□□ -1.63
GYPB-212ENST00000511198 GALNT7Q86SF2 657 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 KMT5CQ86Y97 462 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 ZDHHC23Q8IYP9 409 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 SYCP3Q8IZU3 236 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 SIX6OS1Q8N1H7 587 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 RFLNBQ8N5W9 214 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 NEXN-AS1Q8NBZ9 246 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 EXD1Q8NHP7 514 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 UBA3Q8TBC4 463 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 RAB3IL1Q8TBN0 382 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 CCDC110Q8TBZ0 833 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 TMEM163Q8TC26 289 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 C1orf54Q8WWF1 131 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 ZNF75CPQ92670 426 aaPredicted RBP4.88□□□□□ -1.63
GYPB-212ENST00000511198 PPM1MQ96MI6 270 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 PCDHB18PQ96TA0 734 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 SIKE1Q9BRV8 207 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 SPATA16Q9BXB7 569 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 PCDH9Q9HC56 1237 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 ZNF160Q9HCG1 818 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 CNGB3Q9NQW8 809 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 KLHL1Q9NR64 748 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 ZNF701Q9NV72 531 aaPredicted RBP4.88□□□□□ -1.63
GYPB-212ENST00000511198 NDE1Q9NXR1 346 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 TBK1Q9UHD2 729 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 ANAPC7Q9UJX3 599 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 KCNK6Q9Y257 313 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 COQ4Q9Y3A0 265 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 SCINQ9Y6U3 715 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 MED12Q93074 2177 aa4.88□□□□□ -1.63
GYPB-212ENST00000511198 TSPAN11A1L157 253 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 TTC36A6NLP5 189 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 A8MX80 341 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 SPAG7O75391 227 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 KRT36O76013 467 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 GOSR1O95249 250 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 PIGNO95427 931 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 IGLV3-25P01717 112 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 PRSS2P07478 247 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 DHRS4L1P0CG22 281 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 CCDC166P0CW27 439 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 CPA3P15088 417 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 ANPEPP15144 967 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 ZNF12P17014 697 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 CYP2A7P20853 494 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 IGFBP5P24593 272 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 RPA3P35244 121 aaPredicted RBP4.87□□□□□ -1.63
GYPB-212ENST00000511198 PGM1P36871 562 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 MAGEA8P43361 318 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 SNRPD1P62314 119 aaKnown RBP4.87□□□□□ -1.63
GYPB-212ENST00000511198 GCNT1Q02742 428 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 SNX1Q13596 522 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 SLC1A5Q15758 541 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 SNRNP35Q16560 246 aaKnown RBP4.87□□□□□ -1.63
GYPB-212ENST00000511198 CNPY1Q3B7I2 92 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 LIN52Q52LA3 116 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 LRRC38Q5VT99 294 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 ARHGAP17Q68EM7 881 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 KRT39Q6A163 491 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 RTL6Q6ICC9 239 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 MYLK4Q86YV6 388 aaPredicted RBP4.87□□□□□ -1.63
GYPB-212ENST00000511198 ZNF683Q8IZ20 524 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 ATP6V0D2Q8N8Y2 350 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 XXYLT1Q8NBI6 393 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 SLC4A11Q8NBS3 891 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 RELL2Q8NC24 303 aaPredicted RBP4.87□□□□□ -1.63
GYPB-212ENST00000511198 SLC35F5Q8WV83 523 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 IRGQQ8WZA9 623 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 RNASE6Q93091 150 aaKnown RBP4.87□□□□□ -1.63
GYPB-212ENST00000511198 APOPT1Q96IL0 206 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 NDNQ99608 321 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 ECSITQ9BQ95 431 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 TTYH2Q9BSA4 534 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 HERPUD2Q9BSE4 406 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 TSSK1BQ9BXA7 367 aa4.87□□□□□ -1.63
GYPB-212ENST00000511198 C1orf21Q9H246 121 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms