RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 CORO1CQ9ULV4 474 aaPredicted RBP9.47□□□□□ -0.89
SNF8-207ENST00000509995 CFL2Q9Y281 166 aa9.47□□□□□ -0.89
SNF8-207ENST00000509995 PPIAL4AQ9Y536 164 aa9.47□□□□□ -0.89
SNF8-207ENST00000509995 LOC105371242A0A075B767 164 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 LOC100653049A0A140TA62 436 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 TCRBV7S2A1N4TA0A589 114 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 ZNF814B7Z6K7 855 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 TO15178 435 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 CXCL13O43927 109 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 PRAMEF4O60810 478 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 SHOX2O60902 331 aaPredicted RBP9.46□□□□□ -0.9
SNF8-207ENST00000509995 EEDO75530 441 aaKnown RBP9.46□□□□□ -0.9
SNF8-207ENST00000509995 KRT34O76011 436 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 NUDT17P0C025 328 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 EPB42P16452 691 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 ZNF83P51522 516 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 SNRPD2P62316 118 aaKnown RBP9.46□□□□□ -0.9
SNF8-207ENST00000509995 SLMAPQ14BN4 828 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 TRIP10Q15642 601 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 MST1LQ2TV78 715 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 VAX1Q5SQQ9 334 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 PRAMEF9Q5VWM5 478 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 GTF2IRD2BQ6EKJ0 949 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 OR4C11Q6IEV9 310 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 KLHL17Q6TDP4 642 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 GTF2IRD2Q86UP8 949 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 P2RY8Q86VZ1 359 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 ZCCHC7Q8N3Z6 543 aaKnown RBP9.46□□□□□ -0.9
SNF8-207ENST00000509995 BPIFB2Q8N4F0 458 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 SPATA6LQ8N4H0 392 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 ZNF473Q8WTR7 871 aaKnown RBP9.46□□□□□ -0.9
SNF8-207ENST00000509995 ABHD3Q8WU67 409 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 ZNF669Q96BR6 464 aaPredicted RBP9.46□□□□□ -0.9
SNF8-207ENST00000509995 FBXO17Q96EF6 278 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 C1GALT1C1Q96EU7 318 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 ADOQ96SZ5 270 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 VRK1Q99986 396 aaPredicted RBP9.46□□□□□ -0.9
SNF8-207ENST00000509995 ACSS1Q9NUB1 689 aaPredicted RBP9.46□□□□□ -0.9
SNF8-207ENST00000509995 GPRC5BQ9NZH0 403 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 KLHL13Q9P2N7 655 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 STOML1Q9UBI4 398 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 ATP23Q9Y6H3 246 aa9.46□□□□□ -0.9
SNF8-207ENST00000509995 GOLGA6L10A0A0M3HER8 536 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 OR5H1A6NKK0 313 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 REM1O75628 298 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 BCL10O95999 233 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 TGFB1P01137 390 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 GGT1P19440 569 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 PGCP20142 388 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 HNMTP50135 292 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 BASP1P80723 227 aaKnown RBP9.45□□□□□ -0.9
SNF8-207ENST00000509995 EFR3AQ14156 821 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 TMEM44Q2T9K0 475 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 C18orf21Q32NC0 220 aaPredicted RBP9.45□□□□□ -0.9
SNF8-207ENST00000509995 RBM20Q5T481 1227 aaKnown RBP9.45□□□□□ -0.9
SNF8-207ENST00000509995 KHDRBS2Q5VWX1 349 aaKnown RBP9.45□□□□□ -0.9
SNF8-207ENST00000509995 ARMC3Q5W041 872 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 SLC46A3Q7Z3Q1 461 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 LMNTD2Q8IXW0 634 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 CCDC89Q8N998 374 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 RNF128Q8TEB7 428 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 PTCD3Q96EY7 689 aaKnown RBP9.45□□□□□ -0.9
SNF8-207ENST00000509995 LRRC37BQ96QE4 947 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 EGFL8Q99944 293 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 CAPS2Q9BXY5 557 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 TSGA10Q9BZW7 698 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 PTGES2Q9H7Z7 377 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 LPAR2Q9HBW0 351 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 SMYD2Q9NRG4 433 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 MED11Q9P086 117 aa9.45□□□□□ -0.9
SNF8-207ENST00000509995 PDP1Q9P0J1 537 aaPredicted RBP9.45□□□□□ -0.9
SNF8-207ENST00000509995 ZCWPW2A0A1B0GU75 182 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 A0A1W2PR48 441 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 SHISA8B8ZZ34 492 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 M0QZ24 198 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 TNFSF11O14788 317 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 ADAMDEC1O15204 470 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 LIASO43766 372 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 SCO2O43819 266 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 TSPAN2O60636 221 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 PDE5AO76074 875 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 SLU7O95391 586 aaKnown RBP9.44□□□□□ -0.9
SNF8-207ENST00000509995 PGM3O95394 542 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 PNPP00491 289 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 MSMBP08118 114 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 ZSCAN5DPP0CG00 497 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 COX5AP20674 150 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 NT5EP21589 574 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 DRD5P21918 477 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 PIK3R1P27986 724 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 EVI2BP34910 448 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 PPICP45877 212 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 PGGT1BP53609 377 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 CDKL1Q00532 357 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 PDAP1Q13442 181 aaKnown RBP9.44□□□□□ -0.9
SNF8-207ENST00000509995 EXOSC7Q15024 291 aaKnown RBP9.44□□□□□ -0.9
SNF8-207ENST00000509995 GLYR1Q49A26 553 aaPredicted RBP9.44□□□□□ -0.9
SNF8-207ENST00000509995 OR52E8Q6IFG1 317 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 TUSC5Q8IXB3 177 aa9.44□□□□□ -0.9
SNF8-207ENST00000509995 RNF10Q8N5U6 811 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms