RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 PTGFRNQ9P2B2 879 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 KCNE5Q9UJ90 142 aa13.87□□□□□ -0.19
PHF3-209ENST00000509330 ZAR1LA6NP61 321 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 LMO7DNF2Z398 122 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 AP3D1O14617 1153 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 ENTPD6O75354 484 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 ATP1B1P05026 303 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 TTKP33981 857 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 NUDT1P36639 197 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 RPS6KA3P51812 740 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 ZP2Q05996 745 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 ST3GAL4Q11206 333 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 DUSP8Q13202 625 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 FHL5Q5TD97 284 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 RRM2BQ7LG56 351 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 RBM12BQ8IXT5 1001 aaKnown RBP13.86□□□□□ -0.19
PHF3-209ENST00000509330 PEX5LQ8IYB4 626 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 SAMD14Q8IZD0 417 aaPredicted RBP13.86□□□□□ -0.19
PHF3-209ENST00000509330 TMEM255BQ8WV15 326 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 RBM18Q96H35 190 aaKnown RBP13.86□□□□□ -0.19
PHF3-209ENST00000509330 ALOXE3Q9BYJ1 711 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 KLHL28Q9NXS3 571 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 ACAD8Q9UKU7 415 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 GPR52Q9Y2T5 361 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 KLK4Q9Y5K2 254 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 ARID1BQ8NFD5 2236 aaPredicted RBP13.86□□□□□ -0.19
PHF3-209ENST00000509330 ASNA1O43681 348 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 CYP7B1O75881 506 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 CBX7O95931 251 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 FUT1P19526 365 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 ITIH1P19827 911 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 DHPSP49366 369 aaPredicted RBP13.86□□□□□ -0.19
PHF3-209ENST00000509330 MGAT2Q10469 447 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 NFATC3Q12968 1075 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 C14orf28Q4W4Y0 310 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 DEPDC4Q8N2C3 294 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 C1orf216Q8TAB5 229 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 TUBA1CQ9BQE3 449 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 CACYBPQ9HB71 228 aaKnown RBP13.86□□□□□ -0.19
PHF3-209ENST00000509330 MGAT4BQ9UQ53 548 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 DSPPQ9NZW4 1301 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 A0A1W2PRQ8 180 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 THY1P04216 161 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 CXCR4P61073 352 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 SLC16A12Q6ZSM3 486 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 MORN4Q8NDC4 146 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 ZFAND2BQ8WV99 257 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 TANKQ92844 425 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 RIT1Q92963 219 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 TCTN2Q96GX1 697 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 SYNDIG1Q9H7V2 258 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 PDE7BQ9NP56 450 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 PSORS1C1Q9UIG5 152 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 SLC7A7Q9UM01 511 aa13.86□□□□□ -0.19
PHF3-209ENST00000509330 CLCA1A8K7I4 914 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 K7ESF4 209 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 TLX2O43763 284 aaPredicted RBP13.85□□□□□ -0.19
PHF3-209ENST00000509330 GABRB1P18505 474 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 FNTBP49356 437 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 ARL4DP49703 201 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 PRTGQ2VWP7 1150 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 MRPL2Q5T653 305 aaKnown RBP13.85□□□□□ -0.19
PHF3-209ENST00000509330 HEPHL1Q6MZM0 1159 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 CASP12Q6UXS9 341 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 SLC35F3Q8IY50 421 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 SLC25A45Q8N413 288 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 FKBP10Q96AY3 582 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 NELL2Q99435 816 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 PIGUQ9H490 435 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 CALML5Q9NZT1 146 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 TMEM150CB9EJG8 249 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 E9PQ18 207 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 CDK4P11802 303 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 RNH1P13489 461 aaKnown RBP13.85□□□□□ -0.19
PHF3-209ENST00000509330 NCS1P62166 190 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 ARHGAP11BQ3KRB8 267 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 MINDY4Q4G0A6 757 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 C1orf189Q5VU69 101 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 ACSM5Q6NUN0 579 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 PRR23CQ6ZRP0 262 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 PRSS48Q7RTY5 328 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 NRMQ8IXM6 262 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 ARHGEF39Q8N4T4 335 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 ZNF420Q8TAQ5 688 aaPredicted RBP13.85□□□□□ -0.19
PHF3-209ENST00000509330 NDNFQ8TB73 568 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 GRHL3Q8TE85 626 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 SLC38A4Q969I6 547 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 DHRS1Q96LJ7 313 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.85□□□□□ -0.19
PHF3-209ENST00000509330 PRTFDC1Q9NRG1 225 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 ERVK-19Q9WJR5 959 aa13.85□□□□□ -0.19
PHF3-209ENST00000509330 GNB5O14775 395 aa13.84□□□□□ -0.19
PHF3-209ENST00000509330 PTHP01270 115 aa13.84□□□□□ -0.19
PHF3-209ENST00000509330 ENTPD1P49961 510 aa13.84□□□□□ -0.19
PHF3-209ENST00000509330 AFF3P51826 1226 aaKnown RBP13.84□□□□□ -0.19
PHF3-209ENST00000509330 GINS1Q14691 196 aa13.84□□□□□ -0.19
PHF3-209ENST00000509330 LARS2Q15031 903 aaKnown RBP13.84□□□□□ -0.19
PHF3-209ENST00000509330 KIF18BQ86Y91 864 aa13.84□□□□□ -0.19
PHF3-209ENST00000509330 ARHGDIGQ99819 225 aa13.84□□□□□ -0.19
PHF3-209ENST00000509330 FUZQ9BT04 418 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms