RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 NSD1Q96L73 2696 aaPredicted RBP9.89□□□□□ -0.83
RNF4-212ENST00000509258 GXYLT2A0PJZ3 443 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 MBD3L4A6NDZ8 208 aaPredicted RBP9.89□□□□□ -0.83
RNF4-212ENST00000509258 MBD3L3A6NE82 208 aaPredicted RBP9.89□□□□□ -0.83
RNF4-212ENST00000509258 MBD3L5A6NJ08 208 aaPredicted RBP9.89□□□□□ -0.83
RNF4-212ENST00000509258 UPK1AO00322 258 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 COPEO14579 308 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 ZIC3O60481 467 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 ABCB7O75027 752 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 ATE1O95260 518 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 IGKV1D-16P01601 117 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 EPXP11678 715 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 EFNA1P20827 205 aaPredicted RBP9.89□□□□□ -0.83
RNF4-212ENST00000509258 CHMP24386 653 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 ALDH3A1P30838 453 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 KRT20P35900 424 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 NCBP2P52298 156 aaKnown RBP eCLIP9.89□□□□□ -0.835e-11■■■□□ 14.7
RNF4-212ENST00000509258 GFRA1P56159 465 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 ZNF155Q12901 538 aaPredicted RBP9.89□□□□□ -0.83
RNF4-212ENST00000509258 CCDC153Q494R4 210 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 LIPMQ5VYY2 423 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 ZCCHC23Q6ZST2 131 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 LARP4Q71RC2 724 aaKnown RBP eCLIP9.89□□□□□ -0.83
RNF4-212ENST00000509258 BIVMQ86UB2 503 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 TRABD2AQ86V40 505 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 SAMD14Q8IZD0 417 aaPredicted RBP9.89□□□□□ -0.83
RNF4-212ENST00000509258 BANPQ8N9N5 519 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 CLHC1Q8NHS4 586 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 MBD3L2Q8NHZ7 208 aaPredicted RBP9.89□□□□□ -0.83
RNF4-212ENST00000509258 ZPLD1Q8TCW7 415 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 TMCO6Q96DC7 493 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 BBS4Q96RK4 519 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 TM9SF2Q99805 663 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 KLHDC3Q9BQ90 382 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 YIPF4Q9BSR8 244 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 GRID1Q9ULK0 1009 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 C19orf53Q9UNZ5 99 aaPredicted RBP9.89□□□□□ -0.83
RNF4-212ENST00000509258 STK38LQ9Y2H1 464 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 WIF1Q9Y5W5 379 aa9.89□□□□□ -0.83
RNF4-212ENST00000509258 TLDC2A0PJX2 215 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 H0Y3Z8 333 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 CASKO14936 926 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 SCO2O43819 266 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 FADS1O60427 444 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 SPAG7O75391 227 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 CBR3O75828 277 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 RSL1D1O76021 490 aaKnown RBP9.88□□□□□ -0.83
RNF4-212ENST00000509258 TMIGD3P0DMS9 266 aaPredicted RBP9.88□□□□□ -0.83
RNF4-212ENST00000509258 UROSP10746 265 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 SDC1P18827 310 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 PRPH2P23942 346 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 GRK2P25098 689 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 CPA2P48052 419 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 LHX2P50458 406 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 DIO3P55073 304 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 CLDN15P56746 228 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 MRPS22P82650 360 aaKnown RBP9.88□□□□□ -0.83
RNF4-212ENST00000509258 SRYQ05066 204 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 GAB1Q13480 694 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 HEPACAMQ14CZ8 416 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 IMPG1Q17R60 797 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 UGT3A2Q3SY77 523 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 SH2D4BQ5SQS7 431 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 KANK2Q63ZY3 851 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 AAGABQ6PD74 315 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 APOOLQ6UXV4 268 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 ZAR1Q86SH2 424 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 ADGRE4PQ86SQ3 457 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 GALNT10Q86SR1 603 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 PLCZ1Q86YW0 608 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 TRIM42Q8IWZ5 723 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 CNPY4Q8N129 248 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 CCDC63Q8NA47 563 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 OR5M1Q8NGP8 315 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 OR14L1PQ8NHC6 308 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 AENQ8WTP8 325 aaKnown RBP9.88□□□□□ -0.83
RNF4-212ENST00000509258 ZBTB9Q96C00 473 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 ERP27Q96DN0 273 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 ELP4Q96EB1 424 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 CCDC126Q96EE4 140 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 SFXN3Q9BWM7 321 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 GSX1Q9H4S2 264 aaPredicted RBP9.88□□□□□ -0.83
RNF4-212ENST00000509258 GIMAP4Q9NUV9 329 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 TAS2R7Q9NYW3 318 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.88□□□□□ -0.83
RNF4-212ENST00000509258 BAIAP2L1Q9UHR4 511 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 DNAJC15Q9Y5T4 150 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 V9GYY5 206 aaPredicted RBP9.88□□□□□ -0.83
RNF4-212ENST00000509258 ROS1P08922 2347 aa9.88□□□□□ -0.83
RNF4-212ENST00000509258 A0A087WV62 115 aa9.87□□□□□ -0.83
RNF4-212ENST00000509258 CLCA1A8K7I4 914 aa9.87□□□□□ -0.83
RNF4-212ENST00000509258 H0YC42 278 aa9.87□□□□□ -0.83
RNF4-212ENST00000509258 PLOD2O00469 737 aa9.87□□□□□ -0.83
RNF4-212ENST00000509258 AZIN1O14977 448 aa9.87□□□□□ -0.83
RNF4-212ENST00000509258 LSM1O15116 133 aaKnown RBP9.87□□□□□ -0.83
RNF4-212ENST00000509258 AKAP10O43572 662 aa9.87□□□□□ -0.83
RNF4-212ENST00000509258 SEC22BO75396 215 aa9.87□□□□□ -0.83
RNF4-212ENST00000509258 TGM6O95932 706 aa9.87□□□□□ -0.83
RNF4-212ENST00000509258 LINC00032P0C843 101 aa9.87□□□□□ -0.83
RNF4-212ENST00000509258 CPN1P15169 458 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms