RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 TBC1D15Q8TC07 691 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 RLN3Q8WXF3 142 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 S100ZQ8WXG8 99 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 ANKRD9Q96BM1 317 aaPredicted RBP8.62□□□□□ -1.03
HTT-205ENST00000509043 MVB12AQ96EY5 273 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 VMP1Q96GC9 406 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 SLC38A2Q96QD8 506 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 MCHR1Q99705 422 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 DCUN1D5Q9BTE7 237 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 G6PC3Q9BUM1 346 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 NAA50Q9GZZ1 169 aaKnown RBP8.62□□□□□ -1.03
HTT-205ENST00000509043 KLHL25Q9H0H3 589 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 DUSP15Q9H1R2 295 aaPredicted RBP8.62□□□□□ -1.03
HTT-205ENST00000509043 ADAP2Q9NPF8 381 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 MKLN1Q9UL63 735 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 TMEM5Q9Y2B1 443 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 MRPS2Q9Y399 296 aaKnown RBP8.62□□□□□ -1.03
HTT-205ENST00000509043 A3GALT2U3KPV4 340 aa8.62□□□□□ -1.03
HTT-205ENST00000509043 A0A087WUU8 490 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 CCDC163A0A0D9SF12 145 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 KRBA1A5PL33 1030 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 TRAPPC13A5PLN9 417 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 HTR3EA5X5Y0 456 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 CDHR4A6H8M9 788 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 ZNF860A6NHJ4 632 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 RHPN2P1A8MT19 583 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 SGK494L7N484 410 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 NUDT21O43809 227 aaKnown RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 BRINP1O60477 761 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 FCMRO60667 390 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 PRAMEF2O60811 474 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 RDH16O75452 317 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 ZBTB11O95625 1053 aaPredicted RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 TP53P04637 393 aaPredicted RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 RPLP0P05388 317 aaKnown RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 MSL3P1P0C860 447 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 CD36P16671 472 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 ZNF182P17025 639 aaPredicted RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 HOXA6P31267 233 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 CSTF2P33240 577 aaKnown RBP eCLIP8.61□□□□□ -1.03
HTT-205ENST00000509043 TRHRP34981 398 aaPredicted RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 MAP2K4P45985 399 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 GPR3P46089 330 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 GABRA4P48169 554 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 AFF3P51826 1226 aaKnown RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 MAZP56270 477 aaKnown RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 GPLD1P80108 840 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 STX4Q12846 297 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 GINS1Q14691 196 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 TIGD6Q17RP2 521 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 TRMT12Q53H54 448 aaKnown RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 SLC27A4Q6P1M0 643 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 ZNF613Q6PF04 617 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 GDPGP1Q6ZNW5 385 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 Q6ZPB1 254 aaPredicted RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 MBOAT2Q6ZWT7 520 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 COMTD1Q86VU5 262 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 VRK2Q86Y07 508 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 KMT5CQ86Y97 462 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 OR4N5Q8IXE1 308 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 FAM160A2Q8N612 972 aaPredicted RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 KBTBD8Q8NFY9 601 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 OR7G1Q8NGA0 311 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 OR9A4Q8NGU2 314 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 C1orf216Q8TAB5 229 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 GPR151Q8TDV0 419 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 UBE2FQ969M7 185 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 SLC41A3Q96GZ6 507 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 RBM18Q96H35 190 aaKnown RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 TMEM80Q96HE8 168 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 HS6ST2Q96MM7 605 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 WDR12Q9GZL7 423 aaKnown RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 SIAEQ9HAT2 523 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 FAM60AQ9NP50 221 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 TBC1D23Q9NUY8 699 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 MRPS18AQ9NVS2 196 aaKnown RBP8.61□□□□□ -1.03
HTT-205ENST00000509043 ERGIC3Q9Y282 383 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 B3GNT3Q9Y2A9 372 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 MMACHCQ9Y4U1 282 aa8.61□□□□□ -1.03
HTT-205ENST00000509043 CPSF4LA6NMK7 179 aaKnown RBP8.6□□□□□ -1.03
HTT-205ENST00000509043 KLF4O43474 513 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 FOXS1O43638 330 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 LDB3O75112 727 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 ENTPD6O75354 484 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 PIAS2O75928 621 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 ZIC2O95409 532 aaPredicted RBP8.6□□□□□ -1.03
HTT-205ENST00000509043 CBX7O95931 251 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 HMGN1P05114 100 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 STSP08842 583 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 INHBBP09529 407 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 ADORA3P0DMS8 318 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 TNNI3P19429 210 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 LCN1P31025 176 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 SOX18P35713 384 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 STT3AP46977 705 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 OMPP47874 163 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 CXCL12P48061 93 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 PSPHP78330 225 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 EFNB1P98172 346 aa8.6□□□□□ -1.03
HTT-205ENST00000509043 ZNF155Q12901 538 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms