RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 TRIM64CA6NLI5 447 aa4.88□□□□□ -1.63
CHD1-205ENST00000508756 NOL4O94818 638 aa4.88□□□□□ -1.63
CHD1-205ENST00000508756 IFNB1P01574 187 aa4.88□□□□□ -1.63
CHD1-205ENST00000508756 CD1EP15812 388 aa4.88□□□□□ -1.63
CHD1-205ENST00000508756 PTBP1P26599 531 aaKnown RBP eCLIP4.88□□□□□ -1.63
CHD1-205ENST00000508756 STK19P49842 368 aaPredicted RBP4.88□□□□□ -1.63
CHD1-205ENST00000508756 P2RY4P51582 365 aa4.88□□□□□ -1.63
CHD1-205ENST00000508756 STARD6P59095 220 aa4.88□□□□□ -1.63
CHD1-205ENST00000508756 OVGP1Q12889 678 aa4.88□□□□□ -1.63
CHD1-205ENST00000508756 ACSF3Q4G176 576 aaPredicted RBP4.88□□□□□ -1.63
CHD1-205ENST00000508756 CCNYQ8ND76 341 aa4.88□□□□□ -1.63
CHD1-205ENST00000508756 OR52E1Q8NGJ3 308 aa4.88□□□□□ -1.63
CHD1-205ENST00000508756 LINC01006Q8NI28 216 aa4.88□□□□□ -1.63
CHD1-205ENST00000508756 MAGEB18Q96M61 343 aa4.88□□□□□ -1.63
CHD1-205ENST00000508756 EXOSC3Q9NQT5 275 aaKnown RBP4.88□□□□□ -1.63
CHD1-205ENST00000508756 ACTR3BQ9P1U1 418 aa4.88□□□□□ -1.63
CHD1-205ENST00000508756 APOBEC3BQ9UH17 382 aaKnown RBP4.88□□□□□ -1.63
CHD1-205ENST00000508756 HOOK1Q9UJC3 728 aaKnown RBP4.88□□□□□ -1.63
CHD1-205ENST00000508756 PIN4Q9Y237 131 aaKnown RBP4.88□□□□□ -1.63
CHD1-205ENST00000508756 H0Y9J4 135 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 K7EPI3 171 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 SDC1P18827 310 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 SLC6A8P48029 635 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 RAB35Q15286 201 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 DCAF4L1Q3SXM0 396 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 C2orf83Q53S99 150 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 HACD2Q6Y1H2 254 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 C1orf186Q6ZWK4 172 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 GOLGA7Q7Z5G4 137 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 LCA5Q86VQ0 697 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 ZNF540Q8NDQ6 660 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 WDR36Q8NI36 951 aaKnown RBP4.87□□□□□ -1.63
CHD1-205ENST00000508756 U2AF1L4Q8WU68 220 aaKnown RBP4.87□□□□□ -1.63
CHD1-205ENST00000508756 C16orf45Q96MC5 204 aaPredicted RBP4.87□□□□□ -1.63
CHD1-205ENST00000508756 RUFY1Q96T51 708 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 DPH7Q9BTV6 452 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 CARD6Q9BX69 1037 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 TSSK1BQ9BXA7 367 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 FTHL17Q9BXU8 183 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 CGNQ9P2M7 1197 aaKnown RBP4.87□□□□□ -1.63
CHD1-205ENST00000508756 EPS15L1Q9UBC2 864 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 IL19Q9UHD0 177 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 CA5BQ9Y2D0 317 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 STRAPQ9Y3F4 350 aaKnown RBP4.87□□□□□ -1.63
CHD1-205ENST00000508756 ATP6V0A2Q9Y487 856 aa4.87□□□□□ -1.63
CHD1-205ENST00000508756 ADAM12O43184 909 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 PTBP3O95758 552 aaKnown RBP4.86□□□□□ -1.63
CHD1-205ENST00000508756 KRT6AP02538 564 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 KRT6BP04259 564 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 ELK1P19419 428 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 RPA1P27694 616 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 KRT6CP48668 564 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 GPC3P51654 580 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 ZSWIM7Q19AV6 140 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 PAGE2BQ5JRK9 111 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 PARGQ86W56 976 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 BATF2Q8N1L9 274 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 ANKRD20A12PQ8NF67 263 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 FAM122AQ96E09 287 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 NACA2Q9H009 215 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 ELOVL2Q9NXB9 296 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 DNPEPQ9ULA0 475 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 FLVCR1Q9Y5Y0 555 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 AP1M2Q9Y6Q5 423 aa4.86□□□□□ -1.63
CHD1-205ENST00000508756 RNF103-CHMP3A0A140T963 221 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 IMPA2O14732 288 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 LATO43561 262 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 CXCL10P02778 98 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 ALPPP05187 535 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 H2AFZP0C0S5 128 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 ALPPL2P10696 532 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 CCNA2P20248 432 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 TRPC1P48995 793 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 SRYQ05066 204 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 PARP6Q2NL67 630 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 LRIT3Q3SXY7 679 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 BEND6Q5SZJ8 279 aaPredicted RBP4.85□□□□□ -1.63
CHD1-205ENST00000508756 MEDAGQ5VYS4 303 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 C9orf40Q8IXQ3 194 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 CCDC36Q8IYA8 594 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 ARFGAP2Q8N6H7 521 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 SLC13A3Q8WWT9 602 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 C19orf24Q9BVV8 132 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 CLIP2Q9UDT6 1046 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 SPAG9O60271 1321 aaKnown RBP4.85□□□□□ -1.63
CHD1-205ENST00000508756 ATP8B3O60423 1300 aa4.85□□□□□ -1.63
CHD1-205ENST00000508756 COL16A1Q07092 1604 aaPredicted RBP4.85□□□□□ -1.63
CHD1-205ENST00000508756 HSPB1P04792 205 aaKnown RBP4.84□□□□□ -1.63
CHD1-205ENST00000508756 PGK2P07205 417 aa4.84□□□□□ -1.63
CHD1-205ENST00000508756 CCDC166P0CW27 439 aa4.84□□□□□ -1.63
CHD1-205ENST00000508756 AHCYP23526 432 aa4.84□□□□□ -1.63
CHD1-205ENST00000508756 ATXN3P54252 364 aaPredicted RBP4.84□□□□□ -1.63
CHD1-205ENST00000508756 RPS6P62753 249 aaKnown RBP4.84□□□□□ -1.63
CHD1-205ENST00000508756 MYBPC1Q00872 1141 aa4.84□□□□□ -1.63
CHD1-205ENST00000508756 ZP4Q12836 540 aa4.84□□□□□ -1.63
CHD1-205ENST00000508756 CAMK4Q16566 473 aa4.84□□□□□ -1.63
CHD1-205ENST00000508756 TOR1AIP1Q5JTV8 583 aa4.84□□□□□ -1.63
CHD1-205ENST00000508756 ZNF57Q68EA5 555 aaPredicted RBP4.84□□□□□ -1.63
CHD1-205ENST00000508756 UFSP1Q6NVU6 142 aa4.84□□□□□ -1.63
CHD1-205ENST00000508756 OLFM4Q6UX06 510 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms