RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 DNAJB13P59910 316 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 NAA20P61599 178 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 MRPS22P82650 360 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 CCDC153Q494R4 210 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 NOXRED1Q6NXP6 359 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 IKBIPQ70UQ0 350 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 KIF18BQ86Y91 864 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 FADS6Q8N9I5 356 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 LINC01560Q8TB33 94 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 WNT2BQ93097 391 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 INTS12Q96CB8 462 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 DTNBP1Q96EV8 351 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 AMDHD1Q96NU7 426 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 C12orf65Q9H3J6 166 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 DDX18Q9NVP1 670 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 OXSMQ9NWU1 459 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 GALNT8Q9NY28 637 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 FLRT3Q9NZU0 649 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 GRID1Q9ULK0 1009 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 ABCG2Q9UNQ0 655 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 RPH3AQ9Y2J0 694 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 PTGDR2Q9Y5Y4 395 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 NIPBLQ6KC79 2804 aaeCLIP11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 SCO2O43819 266 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 FADS1O60427 444 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 CRCPO75575 148 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 TNFSF13O75888 250 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 PRPH2P23942 346 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 CRHR1P34998 444 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 KIAA0040Q15053 153 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 CYP27C1Q4G0S4 372 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 SH2D4BQ5SQS7 431 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 CLEC6AQ6EIG7 209 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 PAMR1Q6UXH9 720 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 TDRPQ86YL5 185 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 OR2M3Q8NG83 312 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 OR4K17Q8NGC6 315 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 EPS8L3Q8TE67 593 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 ELP4Q96EB1 424 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 EGLN2Q96KS0 407 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 TMUB1Q9BVT8 246 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 RBM24Q9BX46 236 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 RTN4RQ9BZR6 473 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 ACBD3Q9H3P7 528 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 RRAGDQ9NQL2 400 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 PPP4R1LQ9P1A2 415 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 PLEKHA6Q9Y2H5 1048 aa11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 WBP11Q9Y2W2 641 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-205ENST00000508319 NPIPB8E9PQR5 432 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 TGM6O95932 706 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 IFI6P09912 130 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 UROSP10746 265 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 CCT5P48643 541 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 DSCR4P56555 118 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 STX5Q13190 355 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 GAB1Q13480 694 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 BCL2A1Q16548 175 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 DECR1Q16698 335 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 CFAP157Q5JU67 520 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 LIPMQ5VYY2 423 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 LUZP2Q86TE4 346 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 GRAMD2AQ8IUY3 354 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 EIF1ADQ8N9N8 165 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 GOT1L1Q8NHS2 421 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 UBLCP1Q8WVY7 318 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 ZNF764Q96H86 408 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 METTL2AQ96IZ6 378 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 ALPK1Q96QP1 1244 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 LMF2Q9BU23 707 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 DSN1Q9H410 356 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 PPCSQ9HAB8 311 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 Q9N2J8 555 aa11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 FAM120CQ9NX05 1096 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-205ENST00000508319 NAV3Q8IVL0 2385 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 A0A1W2PNV4 684 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 SMIM23A6NLE4 172 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 COPEO14579 308 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 GOSR1O95249 250 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 IL33O95760 270 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 CPA3P15088 417 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 DNASE1P24855 282 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 CPA2P48052 419 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 CLDN15P56746 228 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 GANABQ14697 944 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 PCLAFQ15004 111 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 ZNHIT3Q15649 155 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 RAET1LQ5VY80 246 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 RNF165Q6ZSG1 346 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 ZNF551Q7Z340 670 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 TGIF2LYQ8IUE0 185 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 UBQLNLQ8IYU4 475 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 C4orf33Q8N1A6 199 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 CCDC63Q8NA47 563 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 CHDHQ8NE62 594 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 OR2T11Q8NH01 316 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 HOXB13Q92826 284 aaPredicted RBP11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 GFM2Q969S9 779 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 MBD6Q96DN6 1003 aa11.75□□□□□ -0.53
HMGCS1-205ENST00000508319 FCRL1Q96LA6 429 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms