RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 CRIM1Q9NZV1 1036 aa13.1□□□□□ -0.31
HMGCS1-203ENST00000507004 CBLCQ9ULV8 474 aa13.1□□□□□ -0.31
HMGCS1-203ENST00000507004 EEF1E1-BLOC1S5C9J1V9 151 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 AZIN1O14977 448 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 EEF1E1O43324 174 aaKnown RBP13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 HCRTR2O43614 444 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 TRIM13O60858 407 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 SEC22BO75396 215 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 KCNH1O95259 989 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 PSMG1O95456 288 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 ZNF708P17019 499 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 KRT4P19013 534 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 DNASE1P24855 282 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 LCN1P31025 176 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 RPL3P39023 403 aaKnown RBP13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 MC3RP41968 323 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 ASMTP46597 345 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 FOXA1P55317 472 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 SLC18A2Q05940 514 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 DCST1Q5T197 706 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 GRAMD2AQ8IUY3 354 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 MTERF3Q96E29 417 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 ZBED6CLQ96FA7 236 aaPredicted RBP13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 AMDHD1Q96NU7 426 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 TUBA1CQ9BQE3 449 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 GLIPR2Q9H4G4 154 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 LRTM1Q9HBL6 345 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 EML4Q9HC35 981 aaKnown RBP13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 POLR3HQ9Y535 204 aaPredicted RBP13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 DOCK7Q96N67 2140 aa13.09□□□□□ -0.31
HMGCS1-203ENST00000507004 C2orf72A6NCS6 295 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 CLCA1A8K7I4 914 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 UPK1AO00322 258 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 SOX30O94993 753 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 HSPA4LO95757 839 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 IL33O95760 270 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 PRPS2P11908 318 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 TACR1P25103 407 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 SERPINB5P36952 375 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 CPA2P48052 419 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 LHX2P50458 406 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 GAS1P54826 345 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 C17orf67Q0P5P2 114 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 KIAA0040Q15053 153 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 SH2D4BQ5SQS7 431 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 FBXW10Q5XX13 1052 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 DESI1Q6ICB0 168 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 ZCCHC12Q6PEW1 402 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 TMEM107Q6UX40 140 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 LRIG3Q6UXM1 1119 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 P4HA3Q7Z4N8 544 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 R3HCC1LQ7Z5L2 792 aaKnown RBP13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 NATD1Q8N6N6 113 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 FADS6Q8N9I5 356 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 C9orf106Q8NAJ2 232 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 EFHD2Q96C19 240 aaPredicted RBP13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 DACH2Q96NX9 599 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 PIGQQ9BRB3 760 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 GPATCH1Q9BRR8 931 aaKnown RBP13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 RBM24Q9BX46 236 aaKnown RBP13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 CXXC4Q9H2H0 198 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 ACSS1Q9NUB1 689 aaPredicted RBP13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 CLCF1Q9UBD9 225 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 NDRG3Q9UGV2 375 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 ST6GALNAC2Q9UJ37 374 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 FBXL2Q9UKC9 423 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 PACSIN3Q9UKS6 424 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 CCL27Q9Y4X3 112 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 OTOGQ6ZRI0 2925 aa13.08□□□□□ -0.32
HMGCS1-203ENST00000507004 MED13LQ71F56 2210 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 TMEM114B3SHH9 223 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 MSTNO14793 375 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 PDPK1O15530 556 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 FADS1O60427 444 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 ZIC3O60481 467 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 FGF4P08620 206 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 MAPK1P28482 360 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 GPC1P35052 558 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 SLCO1A2P46721 670 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 IST1P53990 364 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 CLDN18P56856 261 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 RPS3AP61247 264 aaKnown RBP13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 SRYQ05066 204 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 CDRT4Q8N9R6 151 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 OR2M3Q8NG83 312 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 PPCDCQ96CD2 204 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 FCRL1Q96LA6 429 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 TBL1XR1Q9BZK7 514 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 REEP4Q9H6H4 257 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 ANKRA2Q9H9E1 313 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 L2HGDHQ9H9P8 463 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 PAQR5Q9NXK6 330 aaPredicted RBP13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 ZNF175Q9Y473 711 aa13.07□□□□□ -0.32
HMGCS1-203ENST00000507004 IGLV3-32A0A0A0MS00 114 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 CASKO14936 926 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 SCO2O43819 266 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 NPHS1O60500 1241 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 TNFRSF21O75509 655 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 SHBGP04278 402 aa13.06□□□□□ -0.32
HMGCS1-203ENST00000507004 NGFRP08138 427 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms