RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 APOBEC1P41238 236 aaKnown RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MAGEA8P43361 318 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PCYT1AP49585 367 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RAB9AP51151 201 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 BCAP31P51572 246 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SEC61GP60059 68 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 YWHAEP62258 255 aaKnown RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MRPS15P82914 257 aaKnown RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MAT1AQ00266 395 aaKnown RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 EEF1A2Q05639 463 aaKnown RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LTBQ06643 244 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 KLRC3Q07444 240 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RASGEF1BQ0VAM2 473 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PJVKQ0ZLH3 352 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MYBPHQ13203 477 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MSLNQ13421 630 aaPredicted RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NONOQ15233 471 aaKnown RBP eCLIP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 P2RY14Q15391 338 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 EIF2S3LQ2VIR3 472 aaKnown RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 AMZ1Q400G9 498 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 XKR7Q5GH72 579 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 OTUD1Q5VV17 481 aaPredicted RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LIPKQ5VXJ0 399 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZNF324BQ6AW86 544 aaPredicted RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 DUS1LQ6P1R4 473 aaKnown RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MTERF4Q7Z6M4 381 aaKnown RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LINC00523Q86TU6 105 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SLC22A16Q86VW1 577 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TMPRSS12Q86WS5 348 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 COMMD2Q86X83 199 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NKAIN4Q8IVV8 208 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ADHFE1Q8IWW8 467 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CCDC65Q8IXS2 484 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MB21D2Q8IYB1 491 aaPredicted RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 BEST3Q8N1M1 668 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 FBXL16Q8N461 479 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 DNAAF3Q8N9W5 541 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 THAP8Q8NA92 274 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SMYD1Q8NB12 490 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SYT14Q8NB59 555 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TRPV1Q8NER1 839 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 OR13F1Q8NGS4 319 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 M1APQ8TC57 530 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ACMSDQ8TDX5 336 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 GPX8Q8TED1 209 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CCDC12Q8WUD4 166 aaPredicted RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CCDC107Q8WV48 283 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 WBP2Q969T9 261 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LRRC45Q96CN5 670 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LGALS12Q96DT0 336 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MED30Q96HR3 178 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 HPDLQ96IR7 371 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 UQCC2Q9BRT2 126 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RBM24Q9BX46 236 aaKnown RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 C10orf88Q9H8K7 445 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ELOVL3Q9HB03 270 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LRRC4Q9HBW1 653 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 GKN1Q9NS71 199 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 HIF1ANQ9NWT6 349 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 NPAP1Q9NZP6 1156 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PSORS1C1Q9UIG5 152 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TMED7Q9Y3B3 224 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 PLXNB2O15031 1838 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ATXN2Q99700 1313 aaKnown RBP3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 COL6A3P12111 3177 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 DOCK7Q96N67 2140 aa3.85□□□□□ -1.79
PDLIM1P4-201ENST00000504327 COL11A1P12107 1806 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 KIAA1217Q5T5P2 1943 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TRAV6A0A075B6T7 132 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 TRAV25A0A0B4J276 109 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 HYKKA2RU49 373 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 C12orf71A8MTZ7 269 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 FAM90A26D6RGX4 464 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 E7EWF7 191 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 F8VZ95 297 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 FOXE1O00358 373 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 DVL1O14640 695 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 LSM1O15116 133 aaKnown RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ARPC1BO15143 372 aaKnown RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 STX7O15400 261 aaKnown RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 JAK2O60674 1132 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 UPK3AO75631 287 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CLPXO76031 633 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CLDN7O95471 211 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 SNAI1O95863 264 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MBP02144 154 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 RAF1P04049 648 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 FCGR1AP12314 374 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CSNK1EP49674 416 aaKnown RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 DAOAP59103 153 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CD81P60033 236 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZP1P60852 638 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 UBE2IP63279 158 aaKnown RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 DMPKQ09013 629 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 Q0VFX4 171 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 ZNF177Q13360 481 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 CDH18Q13634 790 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 HNF4GQ14541 408 aa3.84□□□□□ -1.79
PDLIM1P4-201ENST00000504327 MESDQ14696 234 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms