RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CEP70Q8NHQ1 597 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 MBD3L2Q8NHZ7 208 aaPredicted RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 DUSP19Q8WTR2 217 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 WNT2BQ93097 391 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 GFM2Q969S9 779 aaKnown RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 EGLN2Q96KS0 407 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 ROPN1BQ9BZX4 212 aaPredicted RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 OR2B2Q9GZK3 357 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 DSN1Q9H410 356 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 PTGES2Q9H7Z7 377 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 ROPN1Q9HAT0 212 aaPredicted RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 DNAJB12Q9NXW2 375 aaKnown RBP10.86□□□□□ -0.67
MED28-203ENST00000503945 PPP4R1LQ9P1A2 415 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 DKKL1Q9UK85 242 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 FBXL2Q9UKC9 423 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 FIS1Q9Y3D6 152 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 L3MBTL1Q9Y468 752 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 TRAF6Q9Y4K3 522 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 CCL27Q9Y4X3 112 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 ARHGAP21Q5T5U3 1957 aa10.86□□□□□ -0.67
MED28-203ENST00000503945 MPDZO75970 2070 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 TUBAL3A6NHL2 446 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 KDM4EB2RXH2 506 aaPredicted RBP10.85□□□□□ -0.67
MED28-203ENST00000503945 NPIPB8E9PQR5 432 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 CTAG2O75638 210 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 RCBTB2O95199 551 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 PRPS2P11908 318 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 DDX5P17844 614 aaKnown RBP10.85□□□□□ -0.67
MED28-203ENST00000503945 GABRA3P34903 492 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 ZNF136P52737 540 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 PRKAG1P54619 331 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 GAS1P54826 345 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 GFRA1P56159 465 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 EEFSECP57772 596 aaKnown RBP10.85□□□□□ -0.67
MED28-203ENST00000503945 BCL2A1Q16548 175 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 FBXL19-AS1Q494R0 122 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 VPS26BQ4G0F5 336 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 RFTN2Q52LD8 501 aaPredicted RBP10.85□□□□□ -0.67
MED28-203ENST00000503945 DCST1Q5T197 706 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 POMZP3Q6PJE2 187 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 BANPQ8N9N5 519 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 GOT1L1Q8NHS2 421 aaPredicted RBP10.85□□□□□ -0.67
MED28-203ENST00000503945 GPR151Q8TDV0 419 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 FAM222BQ8WU58 562 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 PPCDCQ96CD2 204 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 SFXN2Q96NB2 322 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 ZFP3Q96NJ6 502 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 UCN2Q96RP3 112 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 TUBA1CQ9BQE3 449 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 POLDIP3Q9BY77 421 aaKnown RBP10.85□□□□□ -0.67
MED28-203ENST00000503945 ACBD3Q9H3P7 528 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 LIME1Q9H400 295 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 REEP4Q9H6H4 257 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 TNFRSF12AQ9NP84 129 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 CCM2LQ9NUG4 571 aaPredicted RBP10.85□□□□□ -0.67
MED28-203ENST00000503945 BAIAP2L1Q9UHR4 511 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 RPH3AQ9Y2J0 694 aaPredicted RBP10.85□□□□□ -0.67
MED28-203ENST00000503945 TMED5Q9Y3A6 229 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 DNAJC15Q9Y5T4 150 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 NCKAP5O14513 1909 aa10.85□□□□□ -0.67
MED28-203ENST00000503945 LINC01387J3KSC0 135 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 AKAP10O43572 662 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 FADS1O60427 444 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 NPHS1O60500 1241 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 KCNH1O95259 989 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 IL33O95760 270 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 TMIGD3P0DMS9 266 aaPredicted RBP10.84□□□□□ -0.67
MED28-203ENST00000503945 EPXP11678 715 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 NEFHP12036 1026 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 PEPDP12955 493 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 TACR1P25103 407 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 ALDH3A1P30838 453 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 EVI2BP34910 448 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 RFX3P48380 749 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 LHX2P50458 406 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 C17orf67Q0P5P2 114 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 GALNTL6Q49A17 601 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 ARL13AQ5H913 290 aaPredicted RBP10.84□□□□□ -0.67
MED28-203ENST00000503945 RNF165Q6ZSG1 346 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 ZNF551Q7Z340 670 aaPredicted RBP10.84□□□□□ -0.67
MED28-203ENST00000503945 R3HCC1LQ7Z5L2 792 aaKnown RBP10.84□□□□□ -0.67
MED28-203ENST00000503945 DDIASQ8IXT1 998 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 RIBC1Q8N443 379 aaPredicted RBP10.84□□□□□ -0.67
MED28-203ENST00000503945 RELL2Q8NC24 303 aaPredicted RBP10.84□□□□□ -0.67
MED28-203ENST00000503945 OR2W6PQ8NHA6 318 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 ZFP28Q8NHY6 868 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 INTS12Q96CB8 462 aaKnown RBP10.84□□□□□ -0.67
MED28-203ENST00000503945 ZBED6CLQ96FA7 236 aaPredicted RBP10.84□□□□□ -0.67
MED28-203ENST00000503945 APOPT1Q96IL0 206 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 TSSK3Q96PN8 268 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 FAM111AQ96PZ2 611 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 LMF2Q9BU23 707 aaKnown RBP10.84□□□□□ -0.67
MED28-203ENST00000503945 CXXC4Q9H2H0 198 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 ANKZF1Q9H8Y5 726 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 HHATLQ9HCP6 504 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 FAM120CQ9NX05 1096 aaKnown RBP10.84□□□□□ -0.67
MED28-203ENST00000503945 CRIM1Q9NZV1 1036 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 MED11Q9P086 117 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 STOML1Q9UBI4 398 aa10.84□□□□□ -0.67
MED28-203ENST00000503945 ABCG2Q9UNQ0 655 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms