RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 KRT20P35900 424 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 PIGAP37287 484 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 MAP3K8P41279 467 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 FOLR3P41439 243 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 PPICP45877 212 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 EFNA3P52797 238 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 IST1P53990 364 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 CDH12P55289 794 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 DCAF7P61962 342 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 SPIBQ01892 262 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 PPP1R8Q12972 351 aaKnown RBP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 PUM1Q14671 1186 aaKnown RBP eCLIP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 NCF4Q15080 339 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 DECR1Q16698 335 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 FLYWCH1Q4VC44 716 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 LIN52Q52LA3 116 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 EIPR1Q53HC9 387 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 CT45A2Q5DJT8 189 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 C3orf38Q5JPI3 329 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 MRPL14Q6P1L8 145 aaKnown RBP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 DHRS4L2Q6PKH6 230 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 NPSR1Q6W5P4 371 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 DEF8Q6ZN54 512 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 CPEB2Q7Z5Q1 589 aaKnown RBP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 ZNF614Q8N883 585 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 BCORP1Q8N888 145 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 OR4N2Q8NGD1 307 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 OR1N1Q8NGS0 311 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 MAGEE2Q8TD90 523 aaPredicted RBP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 ZNF721Q8TF20 911 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 HOXB13Q92826 284 aaPredicted RBP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 PMM1Q92871 262 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 ZG16BQ96DA0 208 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 LCORQ96JN0 433 aaPredicted RBP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 ZNF300Q96RE9 604 aaPredicted RBP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 SPSB2Q99619 263 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 LPAR4Q99677 370 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 ZNF350Q9GZX5 532 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 Q9H521 79 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 MRTO4Q9UKD2 239 aaKnown RBP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 CBLCQ9ULV8 474 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 ZNF443Q9Y2A4 671 aaPredicted RBP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 GPR55Q9Y2T6 319 aaPredicted RBP6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 ORC6Q9Y5N6 252 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 ENPP4Q9Y6X5 453 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 TTC28Q96AY4 2481 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 NCOR1O75376 2440 aa6.59□□□□□ -1.35
GPATCH4-209ENST00000498641 ARID1BQ8NFD5 2236 aaPredicted RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 CABIN1Q9Y6J0 2220 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 NPIPA5A0A0B4J1W7 369 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 PRAMEF25A6NGN4 478 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 FRG2CA6NGY1 282 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 AGAP5A6NIR3 686 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 SAGE2PA6NJ88 616 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 NPIPA7E9PJI5 369 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 J3KTA2 159 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 M0R3H8 397 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 SYT5O00445 386 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 PEX12O00623 359 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 PRKNO60260 465 aaPredicted RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 KIAA0513O60268 411 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 DPM1O60762 260 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 REM1O75628 298 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 DNAJB5O75953 348 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 SEC24DO94855 1032 aaPredicted RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 TNFSF15O95150 251 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 GADD45GO95257 159 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 ZIC2O95409 532 aaPredicted RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 LGI1O95970 557 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 IGKV1D-16P01601 117 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 IGHEP01854 428 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 THBS1P07996 1170 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 GUSBP08236 651 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 NPIPA8P0DM63 369 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 HPGDP15428 266 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 TCN2P20062 427 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 FPR1P21462 350 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 PRKACGP22612 351 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 IFNA8P32881 189 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 DCTP40126 519 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 RNF144AP50876 292 aaPredicted RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 ALDH3A2P51648 485 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 NR0B1P51843 470 aaKnown RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 LIMK1P53667 647 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 PSMD4P55036 377 aaKnown RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 RGS8P57771 180 aaPredicted RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 SMIM11AP58511 58 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 RPS15P62841 145 aaKnown RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 TARDBPQ13148 414 aaKnown RBP eCLIP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 DAG1Q14118 895 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 GANABQ14697 944 aaKnown RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 LAPTM4AQ15012 233 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 IQCCQ4KMZ1 466 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 FAM69BQ5VUD6 431 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 SHQ1Q6PI26 577 aaKnown RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 PAPD4Q6PIY7 484 aaKnown RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 TBPL2Q6SJ96 375 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 TMEM205Q6UW68 189 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 FAM198BQ6UWH4 519 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 HSDL2Q6YN16 418 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms