RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SCARB2Q14108 478 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 SYPL1Q16563 259 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 CYP27C1Q4G0S4 372 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 DNAL1Q4LDG9 190 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 RPS26P11Q5JNZ5 115 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-227ENST00000498056 SERPINA11Q86U17 422 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 SLC15A3Q8IY34 581 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 ZZZ3Q8IYH5 903 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 ARMC10Q8N2F6 343 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 SLC15A4Q8N697 577 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 RNF148Q8N7C7 305 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 ZNF614Q8N883 585 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 C11orf65Q8NCR3 313 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 OR2T12Q8NG77 320 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 ADOQ96SZ5 270 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 KCTD14Q9BQ13 255 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-227ENST00000498056 G6PC3Q9BUM1 346 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 PRORYQ9H606 182 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 ZBTB20Q9HC78 741 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-227ENST00000498056 A4GALTQ9NPC4 353 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 THUMPD1Q9NXG2 353 aaKnown RBP12.5□□□□□ -0.41
CPNE1-227ENST00000498056 STMN3Q9NZ72 180 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 GMPR2Q9P2T1 348 aaKnown RBP12.5□□□□□ -0.41
CPNE1-227ENST00000498056 USP22Q9UPT9 525 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 WDR45Q9Y484 360 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 GMEB1Q9Y692 573 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 FREM3P0C091 2139 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 HEATR5AQ86XA9 2040 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 OR5H15A6NDH6 313 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 KIAA0513O60268 411 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 ICOSLGO75144 302 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 UGT2B11O75310 529 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 ATP5HO75947 161 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 PDE5AO76074 875 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 SOX30O94993 753 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 H6PDO95479 791 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 CHRM4P08173 479 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 BMP2P12643 396 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 CYP4B1P13584 511 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 TCN1P20061 433 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-227ENST00000498056 AQP1P29972 269 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 CYB561P49447 251 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 GSK3BP49841 420 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 HLCSP50747 726 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 RASSF2P50749 326 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 EEFSECP57772 596 aaKnown RBP12.49□□□□□ -0.41
CPNE1-227ENST00000498056 NCALDP61601 193 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 CDK6Q00534 326 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 TUBA3CQ13748 450 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 GPR68Q15743 365 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.49□□□□□ -0.41
CPNE1-227ENST00000498056 ZNF630Q2M218 657 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-227ENST00000498056 ARHGAP11BQ3KRB8 267 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 FLYWCH1Q4VC44 716 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 ZNF468Q5VIY5 522 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-227ENST00000498056 DESI1Q6ICB0 168 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 HEPHL1Q6MZM0 1159 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 TUBA3EQ6PEY2 450 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 LYPD8Q6UX82 237 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 NET1Q7Z628 596 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-227ENST00000498056 HMGN2P46Q86SG4 172 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 ZAR1Q86SH2 424 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 PTOV1Q86YD1 416 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 CHDHQ8NE62 594 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-227ENST00000498056 OR10G3Q8NGC4 313 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 TM9SF4Q92544 642 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 DIO2Q92813 273 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 SLC7A6OSQ96CW6 309 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-227ENST00000498056 REXO5Q96IC2 774 aaKnown RBP12.49□□□□□ -0.41
CPNE1-227ENST00000498056 COL21A1Q96P44 957 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 SPATA9Q9BWV2 254 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 ZNF350Q9GZX5 532 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 RUBCNLQ9H714 662 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 FBXO34Q9NWN3 711 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 TAS2R1Q9NYW7 299 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 PLA2G3Q9NZ20 509 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 LRFN1Q9P244 771 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 LIPT1Q9Y234 373 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 AP3M1Q9Y2T2 418 aa12.49□□□□□ -0.41
CPNE1-227ENST00000498056 PCDHGA9Q9Y5G4 932 aaKnown RBP12.49□□□□□ -0.41
CPNE1-227ENST00000498056 PRAMEF27A3QJZ7 478 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 ERICH4A6NGS2 130 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 OR6C70A6NIJ9 312 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 TSPAN2O60636 221 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 ABCB7O75027 752 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 STX11O75558 287 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 UTS2O95399 124 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 IL33O95760 270 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 PCGF2P35227 344 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 DCTP40126 519 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 RNF144AP50876 292 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-227ENST00000498056 KCNAB2Q13303 367 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 EFR3AQ14156 821 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 GNA13Q14344 377 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 OR1C1Q15619 314 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 NTRK2Q16620 822 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 VMACQ2NL98 169 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 SAMD4BQ5PRF9 694 aaKnown RBP12.48□□□□□ -0.41
CPNE1-227ENST00000498056 PRAMEF20Q5VT98 475 aa12.48□□□□□ -0.41
CPNE1-227ENST00000498056 ERICH5Q6P6B1 374 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms