RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 TLX3O43711 291 aaPredicted RBP22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 TPST1O60507 370 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 EPPINO95925 133 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 HNRNPCL4P0DMR1 293 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 RFX3P48380 749 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 GLIPR1L2Q4G1C9 344 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 INTS11Q5TA45 600 aaKnown RBP22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 SLC30A8Q8IWU4 369 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 OR8K3Q8NH51 312 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 BBS10Q8TAM1 723 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 NUBPLQ8TB37 319 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 M1APQ8TC57 530 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 TMBIM1Q969X1 311 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 WFDC6Q9BQY6 131 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 FLRT3Q9NZU0 649 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 MSRB2Q9Y3D2 182 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 WDR45Q9Y484 360 aa22.39■■□□□ 1.17
TNFRSF4-203ENST00000497869 PRAMEF25A6NGN4 478 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 PEX12O00623 359 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 GMNNO75496 209 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 NADKO95544 446 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 HPP00738 406 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 CD247P20963 164 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 RNF144AP50876 292 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 EXT1Q16394 746 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 PRAMEF8Q5VWM4 474 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 PRAMEF7Q5VXH5 474 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 TCTN3Q6NUS6 607 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 EIF3MQ7L2H7 374 aaKnown RBP22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 C17orf47Q8NEP4 570 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 EFHD2Q96C19 240 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 TRIM15Q9C019 465 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 OR10H1Q9Y4A9 318 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 ZNF451Q9Y4E5 1061 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 PCDHGB3Q9Y5G1 929 aa22.38■■□□□ 1.17
TNFRSF4-203ENST00000497869 LAMA5O15230 3695 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 DHRS12A0PJE2 317 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 TMEM247A6NEH6 219 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 TTC36A6NLP5 189 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 WWP2O00308 870 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 KIAA0513O60268 411 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 STX11O75558 287 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 ZNF682O95780 498 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 ITGAMP11215 1152 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 TNFRSF1BP20333 461 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 ST13P50502 369 aaKnown RBP22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 DCAF7P61962 342 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 GPR68Q15743 365 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 PATL1Q86TB9 770 aaKnown RBP22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 KIAA1143Q96AT1 154 aaPredicted RBP22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 DUS3LQ96G46 650 aaKnown RBP22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 SEPHS2Q99611 448 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 S100A14Q9HCY8 104 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 CLDN24A6NM45 220 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 NKX2-8O15522 239 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 ZFAND5O76080 213 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 MT-ND1P03886 318 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 ETS2P15036 469 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 HLA-DQA1Q5Y7H0 255 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 VRK2Q86Y07 508 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 RSRC1Q96IZ7 334 aaKnown RBP22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 HSH2DQ96JZ2 352 aa22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 CCM2LQ9NUG4 571 aaPredicted RBP22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 NKX1-2Q9UD57 310 aaPredicted RBP22.37■■□□□ 1.17
TNFRSF4-203ENST00000497869 NPIPB9F8W1W9 429 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 EFSO43281 561 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 STAMBPO95630 424 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 AK1P00568 194 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 SEMG1P04279 462 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 ABCD3P28288 659 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 ID4P47928 161 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 SELENOWP63302 87 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 PLAURQ03405 335 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 GNA13Q14344 377 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 MTX3Q5HYI7 312 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 FBXW10Q5XX13 1052 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 FCRLBQ6BAA4 426 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 TSEN54Q7Z6J9 526 aaKnown RBP22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 EID3Q8N140 333 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 TP53INP1Q96A56 240 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 PYURFQ96I23 114 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 MYOTQ9UBF9 498 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 LOC400499M0QZD8 3231 aa22.36■■□□□ 1.17
TNFRSF4-203ENST00000497869 H0Y3Z8 333 aa22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 BCAS1O75363 584 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 UGT2B17O75795 530 aa22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 RPS4Y1P22090 263 aaKnown RBP22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 KCNJ10P78508 379 aa22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 LYPD8Q6UX82 237 aa22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 RAB43Q86YS6 212 aa22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 ZNF619Q8N2I2 560 aa22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 OR4C3Q8NH37 302 aa22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 APOBEC4Q8WW27 367 aaKnown RBP22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 TPD52L3Q96J77 140 aa22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 DEFB126Q9BYW3 111 aa22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 MTHFD2LQ9H903 347 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 CALML5Q9NZT1 146 aa22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 ANAPC2Q9UJX6 822 aa22.35■■□□□ 1.17
TNFRSF4-203ENST00000497869 AURKCQ9UQB9 309 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms