RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 FGD2Q7Z6J4 655 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 ZER1Q7Z7L7 766 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 TMPRSS11BQ86T26 416 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 OAFQ86UD1 273 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 BBS1Q8NFJ9 593 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 OR4D11Q8NGI4 311 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 KAT2AQ92830 837 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 NKX6-2Q9C056 277 aaPredicted RBP12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 ESRP2Q9H6T0 727 aaKnown RBP12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 WDR26Q9H7D7 661 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 C5AR2Q9P296 337 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 A8MXK9 166 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 G3V3Q6 166 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 K7ERQ8 282 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 RECKO95980 971 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 ACVR1BP36896 505 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 MEOX2P50222 304 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 CRYBB1P53674 252 aaPredicted RBP12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 HLXQ14774 488 aaPredicted RBP12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 SLITRK4Q8IW52 837 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 OR56B4Q8NH76 319 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC16A10Q8TF71 515 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 ZFPM2Q8WW38 1151 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 WNT2BQ93097 391 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 MTG2Q9H4K7 406 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 NTMQ9P121 344 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 TRPC4Q9UBN4 977 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 CD84Q9UIB8 345 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 CSNK1G3Q9Y6M4 447 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 ZC3H12DA2A288 527 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 TRABD2BA6NFA1 517 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC28A2O43868 658 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 EFCAB14O75071 495 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 PEX14O75381 377 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 ZNF254O75437 659 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 IGF2P01344 180 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 APOC1P02654 83 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 ANXA7P20073 488 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 PTGER1P34995 402 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC11A2P49281 568 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 SGSHP51688 502 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 HSPB3Q12988 150 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 HBMQ6B0K9 141 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 SFXN4Q6P4A7 337 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 SERPINA13PQ6UXR4 307 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 RFLNAQ6ZTI6 216 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 TSPAN33Q86UF1 283 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 PM20D2Q8IYS1 436 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 GPR32P1Q8NGA4 272 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 OR4D9Q8NGE8 314 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 FATE1Q969F0 183 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 MAGEH1Q9H213 219 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 GPBP1L1Q9HC44 474 aaPredicted RBP12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC22A11Q9NSA0 550 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 MBD1Q9UIS9 605 aaPredicted RBP12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 OR10H1Q9Y4A9 318 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 IRAK3Q9Y616 596 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 MYADML2A6NDP7 307 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 D6RAR5 112 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 RBMS1P29558 406 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 RAE1P78406 368 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 CDC42EP1Q00587 391 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 C11orf88Q6PI97 169 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 CEACAM19Q7Z692 300 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 SERPINA12Q8IW75 414 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 YIPF5Q969M3 257 aa12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 TREX2Q9BQ50 279 aaPredicted RBP12.29□□□□□ -0.44
GAPVD1-220ENST00000497580 DRGXA6NNA5 263 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 A8MVJ9 347 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 TO15178 435 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 CR2P20023 1033 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 PVALBP20472 110 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 ACADLP28330 430 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 BUD31P41223 144 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 BTN2A1Q7KYR7 527 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 HDDC3Q8N4P3 179 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 L3MBTL4Q8NA19 623 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 SCARB1Q8WTV0 552 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 XAGE5Q8WWM1 108 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 MRPS24Q96EL2 167 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 TINAGL1Q9GZM7 467 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 FBXO44Q9H4M3 255 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 REEP4Q9H6H4 257 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 DDX31Q9H8H2 851 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC6A20Q9NP91 592 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 DISC1C4P0D8 188 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 ANHXE9PGG2 379 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 KHDRBS3O75525 346 aaKnown RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 RGS9O75916 674 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 RD3LP0DJH9 198 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 ARAFP10398 606 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 ZNF8P17098 575 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 PTBP1P26599 531 aaKnown RBP eCLIP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 TIA1P31483 386 aaKnown RBP eCLIP12.28□□□□□ -0.446e-6■■□□□ 11.4
GAPVD1-220ENST00000497580 BMP8BP34820 402 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 HOXA1P49639 335 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 TLE2Q04725 743 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 PLD1Q13393 1074 aa12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 GK2Q14410 553 aaPredicted RBP12.28□□□□□ -0.44
GAPVD1-220ENST00000497580 AKIRIN2Q53H80 203 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms