RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 C12orf60Q5U649 245 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 PAMR1Q6UXH9 720 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 PINX1Q96BK5 328 aaKnown RBP3.59□□□□□ -1.83
VPS36-206ENST00000497149 TADA1Q96BN2 335 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 ELMO2Q96JJ3 720 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 CCT8L2Q96SF2 557 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 OPN3Q9H1Y3 402 aaPredicted RBP3.59□□□□□ -1.83
VPS36-206ENST00000497149 EXOSC3Q9NQT5 275 aaKnown RBP3.59□□□□□ -1.83
VPS36-206ENST00000497149 ELOVL2Q9NXB9 296 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 PARD3Q8TEW0 1356 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 IGHV3-35A0A0C4DH35 117 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 FAM220BPB1ANY3 271 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 WASH3PC4AMC7 463 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 F8WDY8 70 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 GPAA1O43292 621 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 PPIHO43447 177 aaKnown RBP3.58□□□□□ -1.84
VPS36-206ENST00000497149 RAMP1O60894 148 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 VPS26AO75436 327 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 CA3P07451 260 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 IGFBP1P08833 259 aaPredicted RBP3.58□□□□□ -1.84
VPS36-206ENST00000497149 H2AFZP0C0S5 128 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 SLC35E2P0CK97 266 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 SLC25A1P53007 311 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 MTTPP55157 894 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 HSF2Q03933 536 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 PDZK1IP1Q13113 114 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 CAMK4Q16566 473 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 SLC39A4Q6P5W5 647 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 C2orf66Q6UXQ4 117 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 WASH2PQ6VEQ5 465 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 PARGQ86W56 976 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 MISPQ8IVT2 679 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 CD177Q8N6Q3 437 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 MRAPQ8TCY5 172 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 LPAR2Q9HBW0 351 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 TAS2R3Q9NYW6 316 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 ABCD2Q9UBJ2 740 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 ATP6V1HQ9UI12 483 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 DUSP12Q9UNI6 340 aa3.58□□□□□ -1.84
VPS36-206ENST00000497149 IGLV3-10A0A075B6K4 115 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 A0A0U1RQV5 110 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 A0A1B0GVY2 172 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 FAM168BA1KXE4 195 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 WASHC1A8K0Z3 465 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 CASKO14936 926 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 DUSP14O95147 198 aaKnown RBP3.57□□□□□ -1.84
VPS36-206ENST00000497149 AKR7A3O95154 331 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 JCHAINP01591 159 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 UQCRBP14927 111 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 DPP4P27487 766 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 GDF1P27539 372 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 AXLP30530 894 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 USP6P35125 1406 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 ACVR1BP36896 505 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 MDH2P40926 338 aaKnown RBP3.57□□□□□ -1.84
VPS36-206ENST00000497149 CD86P42081 329 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 EMDP50402 254 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 ERVPABLB-1P60509 514 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 HTD2P86397 168 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 PUDPQ08623 228 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 MEDAGQ5VYS4 303 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 SLX4IPQ5VYV7 408 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 OLFML2AQ68BL7 652 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 SPAG16Q8N0X2 631 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 SELENOMQ8WWX9 145 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 VSTM2LQ96N03 204 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 SIGLEC12Q96PQ1 595 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 OR5M11Q96RB7 305 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 FICDQ9BVA6 458 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 TBC1D10AQ9BXI6 508 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 CCSER1Q9C0I3 900 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 ELOVL4Q9GZR5 314 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 GPN2Q9H9Y4 310 aaPredicted RBP3.57□□□□□ -1.84
VPS36-206ENST00000497149 C1orf123Q9NWV4 160 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 Q9UF83 564 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 EIF3LQ9Y262 564 aaKnown RBP3.57□□□□□ -1.84
VPS36-206ENST00000497149 VSIG4Q9Y279 399 aa3.57□□□□□ -1.84
VPS36-206ENST00000497149 CFAP65Q6ZU64 1925 aaKnown RBP3.56□□□□□ -1.84
VPS36-206ENST00000497149 CCDC7Q96M83 1385 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 ATP8B3O60423 1300 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 FRG2CA6NGY1 282 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 C19orf81C9J6K1 198 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 CHADO15335 359 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 SCGB2A1O75556 95 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 B3GALNT1O75752 331 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 GIG44P09565 113 aaPredicted RBP3.56□□□□□ -1.84
VPS36-206ENST00000497149 PAICSP22234 425 aaKnown RBP3.56□□□□□ -1.84
VPS36-206ENST00000497149 CDH5P33151 784 aaPredicted RBP3.56□□□□□ -1.84
VPS36-206ENST00000497149 XCR1P46094 333 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 GPC3P51654 580 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 SCGB2A2Q13296 93 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 ASAH1Q13510 395 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 TGIF1Q15583 401 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 GSG1Q2KHT4 349 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 PAN3Q58A45 887 aaKnown RBP3.56□□□□□ -1.84
VPS36-206ENST00000497149 ZNF57Q68EA5 555 aaPredicted RBP3.56□□□□□ -1.84
VPS36-206ENST00000497149 TMEM184AQ6ZMB5 413 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 STAC2Q6ZMT1 411 aa3.56□□□□□ -1.84
VPS36-206ENST00000497149 LHFPL4Q7Z7J7 247 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms