RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 UPK1AO00322 258 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 COPEO14579 308 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 ZIC3O60481 467 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 RSL1D1O76021 490 aaKnown RBP11.73□□□□□ -0.53
FN1-226ENST00000496542 SLITRK5O94991 958 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 RCBTB2O95199 551 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 EPXP11678 715 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 ZNF708P17019 499 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 CLDN18P56856 261 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 DNAJB13P59910 316 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 NAA20P61599 178 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 PSG6Q00889 435 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 DAZAP2Q15038 168 aaPredicted RBP11.73□□□□□ -0.53
FN1-226ENST00000496542 ZNHIT3Q15649 155 aaPredicted RBP11.73□□□□□ -0.53
FN1-226ENST00000496542 CYP27C1Q4G0S4 372 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 CLEC6AQ6EIG7 209 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 NOXRED1Q6NXP6 359 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 SH2D5Q6ZV89 423 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 IKBIPQ70UQ0 350 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 TRIM46Q7Z4K8 759 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 P4HA3Q7Z4N8 544 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 ADGRE4PQ86SQ3 457 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 UBQLNLQ8IYU4 475 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 FAM76AQ8TAV0 307 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.73□□□□□ -0.53
FN1-226ENST00000496542 EPS8L3Q8TE67 593 aaKnown RBP11.73□□□□□ -0.53
FN1-226ENST00000496542 AMDHD1Q96NU7 426 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 FOXC2Q99958 501 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 YIPF4Q9BSR8 244 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 ACBD3Q9H3P7 528 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 Q9N2J8 555 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 RRAGDQ9NQL2 400 aaPredicted RBP11.73□□□□□ -0.53
FN1-226ENST00000496542 GALNT8Q9NY28 637 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 GRID1Q9ULK0 1009 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 PTGDR2Q9Y5Y4 395 aa11.73□□□□□ -0.53
FN1-226ENST00000496542 ROS1P08922 2347 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 NIPBLQ6KC79 2804 aaeCLIP11.72□□□□□ -0.53
FN1-226ENST00000496542 SEC22BO75396 215 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 UROSP10746 265 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 CPA3P15088 417 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 HK1P19367 917 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 CHMP24386 653 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 CRHR1P34998 444 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 CPOXP36551 454 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 CCT5P48643 541 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 DSCR4P56555 118 aaPredicted RBP11.72□□□□□ -0.53
FN1-226ENST00000496542 B3GALT5-AS1P59052 145 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 HSPB3Q12988 150 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 DECR1Q16698 335 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 RAET1LQ5VY80 246 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 CHMP1BQ7LBR1 199 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 C4orf33Q8N1A6 199 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 OR2L13Q8N349 312 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 FADS6Q8N9I5 356 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 CHDHQ8NE62 594 aaPredicted RBP11.72□□□□□ -0.53
FN1-226ENST00000496542 OR2M3Q8NG83 312 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 GFM2Q969S9 779 aaKnown RBP11.72□□□□□ -0.53
FN1-226ENST00000496542 ELP4Q96EB1 424 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 UCN2Q96RP3 112 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 CXXC4Q9H2H0 198 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 PIGMQ9H3S5 423 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 EQTNQ9NQ60 294 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 OXSMQ9NWU1 459 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 FAM120CQ9NX05 1096 aaKnown RBP11.72□□□□□ -0.53
FN1-226ENST00000496542 TAS2R7Q9NYW3 318 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 MED11Q9P086 117 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 EDARQ9UNE0 448 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 ABCG2Q9UNQ0 655 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 WBP11Q9Y2W2 641 aaKnown RBP11.72□□□□□ -0.53
FN1-226ENST00000496542 MRPS18CQ9Y3D5 142 aaKnown RBP11.72□□□□□ -0.53
FN1-226ENST00000496542 FIS1Q9Y3D6 152 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 ARID1AO14497 2285 aa11.72□□□□□ -0.53
FN1-226ENST00000496542 ZNF469Q96JG9 3925 aaPredicted RBP11.72□□□□□ -0.53
FN1-226ENST00000496542 A0A1W2PNV4 684 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 PDPK1O15530 556 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 HCRTR2O43614 444 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 FADS1O60427 444 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 DIAPH2O60879 1101 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 PSMG1O95456 288 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 TGM6O95932 706 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 CD99P14209 185 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 GPC1P35052 558 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 DIO3P55073 304 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 GAB1Q13480 694 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 POU4F3Q15319 338 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 LIPMQ5VYY2 423 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 ANKRD26P1Q6NSI1 321 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 PAMR1Q6UXH9 720 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 ZNF551Q7Z340 670 aaPredicted RBP11.71□□□□□ -0.53
FN1-226ENST00000496542 TGIF2LYQ8IUE0 185 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 CNEP1R1Q8N9A8 125 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 OR5M1Q8NGP8 315 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 CIDECQ96AQ7 238 aaPredicted RBP11.71□□□□□ -0.53
FN1-226ENST00000496542 EGLN2Q96KS0 407 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 RTN4RQ9BZR6 473 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 LRTM1Q9HBL6 345 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 SDHAF3Q9NRP4 125 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 C1orf109Q9NX04 203 aa11.71□□□□□ -0.53
FN1-226ENST00000496542 MRTO4Q9UKD2 239 aaKnown RBP11.71□□□□□ -0.53
FN1-226ENST00000496542 PACSIN3Q9UKS6 424 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms