RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 GTF2IRD2BQ6EKJ0 949 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 LRRC74BQ6ZQY2 392 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 GTF2IRD2Q86UP8 949 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 CMIPQ8IY22 773 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 GOLM1Q8NBJ4 401 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 OR9I1Q8NGQ6 314 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 SARAFQ96BY9 339 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 TRNT1Q96Q11 434 aaKnown RBP8□□□□□ -1.13
U2AF1-212ENST00000496462 CDRT15Q96T59 188 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 ZNF556Q9HAH1 456 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 ALKBH4Q9NXW9 302 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 ANAPC2Q9UJX6 822 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 A0A1B0GTL3 188 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 OR2J2O76002 312 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 ZNF24P17028 368 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 CXCR1P25024 350 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 CDK9P50750 372 aaKnown RBP7.99□□□□□ -1.13
U2AF1-212ENST00000496462 MLF1P58340 268 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 RAE1P78406 368 aaKnown RBP7.99□□□□□ -1.13
U2AF1-212ENST00000496462 FUT7Q11130 342 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 PCOLCEQ15113 449 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 LTB4RQ15722 352 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 INAQ16352 499 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 MICU2Q8IYU8 434 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 DPP10Q8N608 796 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 SFXN2Q96NB2 322 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 TRIM2Q9C040 744 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 ACAD8Q9UKU7 415 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 ANKRD12Q6UB98 2062 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 ERICH4A6NGS2 130 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 FCGR1AP12314 374 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 CD247P20963 164 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 EIF1P41567 113 aaKnown RBP7.99□□□□□ -1.13
U2AF1-212ENST00000496462 GUCA1AP43080 201 aaPredicted RBP7.99□□□□□ -1.13
U2AF1-212ENST00000496462 HBA1P69905 142 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 FLOT2Q14254 428 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 ZNF169Q14929 603 aaPredicted RBP7.99□□□□□ -1.13
U2AF1-212ENST00000496462 ZNF385CQ66K41 422 aaPredicted RBP7.99□□□□□ -1.13
U2AF1-212ENST00000496462 B3GNTL1Q67FW5 361 aaPredicted RBP7.99□□□□□ -1.13
U2AF1-212ENST00000496462 FIGNL1Q6PIW4 674 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 PLEKHM3Q6ZWE6 761 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 OR10A6Q8NH74 314 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 TMBIM1Q969X1 311 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 TPD52L3Q96J77 140 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 ANKRD27Q96NW4 1050 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 OR7D2Q96RA2 312 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 C20orf27Q9GZN8 174 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 VCX3BQ9H321 246 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 CPNE5Q9HCH3 593 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 GIN1Q9NXP7 522 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 SNX13Q9Y5W8 968 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 PIEZO2Q9H5I5 2752 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 NBASA2RRP1 2371 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 ERVH48-1M5A8F1 160 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 TLX3O43711 291 aaPredicted RBP7.99□□□□□ -1.13
U2AF1-212ENST00000496462 CDC40O60508 579 aaKnown RBP eCLIP7.99□□□□□ -1.13
U2AF1-212ENST00000496462 ALDOCP09972 364 aaKnown RBP7.99□□□□□ -1.13
U2AF1-212ENST00000496462 POLE2P56282 527 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 LIPEQ05469 1076 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 KIF26BQ2KJY2 2108 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 PRICKLE4Q2TBC4 344 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 TRMT12Q53H54 448 aaKnown RBP7.99□□□□□ -1.13
U2AF1-212ENST00000496462 ZNF628Q5EBL2 1059 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 MTFR2Q6P444 385 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 OR2L13Q8N349 312 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 DOK4Q8TEW6 326 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 RNF32Q9H0A6 362 aa7.99□□□□□ -1.13
U2AF1-212ENST00000496462 ZFC3H1O60293 1989 aaKnown RBP7.99□□□□□ -1.13
U2AF1-212ENST00000496462 A0A087WV48 116 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 PRRG2O14669 202 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 EIF4E2O60573 245 aaKnown RBP7.98□□□□□ -1.13
U2AF1-212ENST00000496462 SCN2BO60939 215 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 IFNW1P05000 195 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 MAN2A2P49641 1150 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 TPD52P55327 224 aaPredicted RBP7.98□□□□□ -1.13
U2AF1-212ENST00000496462 COL9A2Q14055 689 aaPredicted RBP7.98□□□□□ -1.13
U2AF1-212ENST00000496462 ZSCAN26Q16670 478 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 COL28A1Q2UY09 1125 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 RAET1LQ5VY80 246 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 BEST3Q8N1M1 668 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 RAB8BQ92930 207 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 EXTL1Q92935 676 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 WBP1Q96G27 269 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 BTBD10Q9BSF8 475 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 SLC25A18Q9H1K4 315 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 ALG2Q9H553 416 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 PIF1Q9H611 641 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 ZNF106Q9H2Y7 1883 aaKnown RBP7.98□□□□□ -1.13
U2AF1-212ENST00000496462 OR6C70A6NIJ9 312 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 ELOA3DA6NLF2 546 aaPredicted RBP7.98□□□□□ -1.13
U2AF1-212ENST00000496462 VGLL3A8MV65 326 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 KLF7O75840 302 aaPredicted RBP7.98□□□□□ -1.13
U2AF1-212ENST00000496462 ITGAMP11215 1152 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 UBL4AP11441 157 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 ETS2P15036 469 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 CDH2P19022 906 aaPredicted RBP7.98□□□□□ -1.13
U2AF1-212ENST00000496462 TCN1P20061 433 aaPredicted RBP7.98□□□□□ -1.13
U2AF1-212ENST00000496462 HNRNPFP52597 415 aaKnown RBP7.98□□□□□ -1.13
U2AF1-212ENST00000496462 DMTNQ08495 405 aa7.98□□□□□ -1.13
U2AF1-212ENST00000496462 CBFBQ13951 182 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms