RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TCRBV21S2A2A0A5A6 115 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 BOLA2-SMG1P6H3BVE0 249 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 TBX1O43435 398 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 HBQ1P09105 142 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 FPR3P25089 353 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 TRHRP34981 398 aaPredicted RBP10.35□□□□□ -0.75
CMSS1-208ENST00000496116 ETV6P41212 452 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 STAT5AP42229 794 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 RABIFP47224 123 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 OMPP47874 163 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 KRR1Q13601 381 aaKnown RBP10.35□□□□□ -0.75
CMSS1-208ENST00000496116 TMEM44Q2T9K0 475 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 MANEAQ5SRI9 462 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 TYW3Q6IPR3 259 aaKnown RBP10.35□□□□□ -0.75
CMSS1-208ENST00000496116 Q6ZSR6 202 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 LYSMD2Q8IV50 215 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 OR4N5Q8IXE1 308 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 DNAJC5GQ8N7S2 189 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 RNF217Q8TC41 542 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 SLC41A3Q96GZ6 507 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 NEURL2Q9BR09 285 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 PRR14Q9BWN1 585 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 ASPNQ9BXN1 380 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 CPNE5Q9HCH3 593 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 TRPV5Q9NQA5 729 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 MRPS18AQ9NVS2 196 aaKnown RBP10.35□□□□□ -0.75
CMSS1-208ENST00000496116 NLGN3Q9NZ94 848 aa10.35□□□□□ -0.75
CMSS1-208ENST00000496116 OR5K4A6NMS3 321 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 LOC110117498-PIK3R3F6TDL0 507 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 ZIC2O95409 532 aaPredicted RBP10.34□□□□□ -0.75
CMSS1-208ENST00000496116 EIF2S1P05198 315 aaKnown RBP10.34□□□□□ -0.75
CMSS1-208ENST00000496116 THBS1P07996 1170 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 RORCP51449 518 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 WNT4P56705 351 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 MLLT1Q03111 559 aaPredicted RBP10.34□□□□□ -0.75
CMSS1-208ENST00000496116 DUSP8Q13202 625 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 MINDY4Q4G0A6 757 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 AGAP7PQ5VUJ5 663 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 TMEM92Q6UXU6 159 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 ZNF836Q6ZNA1 936 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 MBOAT2Q6ZWT7 520 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 RANBP3LQ86VV4 465 aaPredicted RBP10.34□□□□□ -0.75
CMSS1-208ENST00000496116 CACTIN-AS1Q8N1I8 211 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 FAM3CQ92520 227 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 PIK3R3Q92569 461 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 FGF11Q92914 225 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 RFKQ969G6 155 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 RNFT2Q96EX2 444 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 NECTIN4Q96NY8 510 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 GSDMCQ9BYG8 508 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 PIGUQ9H490 435 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 CLDND1Q9NY35 253 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 C19orf53Q9UNZ5 99 aaPredicted RBP10.34□□□□□ -0.75
CMSS1-208ENST00000496116 A0A087WV62 115 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 LOC105369274A0A096LPK9 316 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 LOC102723532A0A0G2JNH3 316 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 A0A0J9YY10 115 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 TMEM129A0AVI4 362 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 HYKKA2RU49 373 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 ZNF670-ZNF695F2Z2N8 137 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 H0YGG7 62 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 SEMA4FO95754 770 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 ATP1B1P05026 303 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 CPEP16870 476 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 CRYBB2P43320 205 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 MTNR1AP48039 350 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 ARF3P61204 181 aaPredicted RBP10.34□□□□□ -0.75
CMSS1-208ENST00000496116 RUNX1T1Q06455 604 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 CDC20Q12834 499 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 DUSP5Q16690 384 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 ZNF628Q5EBL2 1059 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 CLEC12AQ5QGZ9 265 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 LIPKQ5VXJ0 399 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 ZCCHC12Q6PEW1 402 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 GDF7Q7Z4P5 450 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 NKAIN4Q8IVV8 208 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 PHC2Q8IXK0 858 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 OR4N4Q8N0Y3 316 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 ANKK1Q8NFD2 765 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 FLCNQ8NFG4 579 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 BAHD1Q8TBE0 780 aaPredicted RBP10.34□□□□□ -0.75
CMSS1-208ENST00000496116 ITPKCQ96DU7 683 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 SDF2Q99470 211 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 KLHL25Q9H0H3 589 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 FGF20Q9NP95 211 aaPredicted RBP10.34□□□□□ -0.75
CMSS1-208ENST00000496116 ADAP2Q9NPF8 381 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 MED17Q9NVC6 651 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 IL20Q9NYY1 176 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 CPNE7Q9UBL6 633 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 SATB2Q9UPW6 733 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 EXOSC1Q9Y3B2 195 aaKnown RBP10.34□□□□□ -0.75
CMSS1-208ENST00000496116 REV3LO60673 3130 aa10.34□□□□□ -0.75
CMSS1-208ENST00000496116 ARHGEF17Q96PE2 2063 aaPredicted RBP10.33□□□□□ -0.76
CMSS1-208ENST00000496116 RANBP2P49792 3224 aaKnown RBP10.33□□□□□ -0.76
CMSS1-208ENST00000496116 KIR2DS5A0A0G2JLQ3 304 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 A0A0G2JNG1 304 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 PRAMEF26H0Y7S4 382 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 KIR2DS3K7RE56 304 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 STX11O75558 287 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 SNX4O95219 450 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms