RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PLXDC1Q8IUK5 500 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 MCATQ8IVS2 390 aaKnown RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 GALNT12Q8IXK2 581 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 ENTHD1Q8IYW4 607 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 CDK20Q8IZL9 346 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 VWA5B2Q8N398 1253 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 ARL14Q8N4G2 192 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 OR7G2Q8NG99 324 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 GPR32P1Q8NGA4 272 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 OR9Q1Q8NGQ5 310 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 TRUB1Q8WWH5 349 aaKnown RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 CDS1Q92903 461 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 PLEKHA8Q96JA3 519 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 SLC38A2Q96QD8 506 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 DOK1Q99704 481 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 ARHGDIGQ99819 225 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 SH3GL3Q99963 347 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 NIPSNAP1Q9BPW8 284 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 ITPAQ9BY32 194 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 CHRNA10Q9GZZ6 450 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 KLHL25Q9H0H3 589 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 SERHL2Q9H4I8 314 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 TBC1D17Q9HA65 648 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 PRTFDC1Q9NRG1 225 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 RASSF1Q9NS23 344 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 CNOT2Q9NZN8 540 aaKnown RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 SELENONQ9NZV5 590 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 KCMF1Q9P0J7 381 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 TESQ9UGI8 421 aaKnown RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 GMEB2Q9UKD1 530 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 MRTO4Q9UKD2 239 aaKnown RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 CDC14AQ9UNH5 594 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 C19orf53Q9UNZ5 99 aaPredicted RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 RNF6Q9Y252 685 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 CFL2Q9Y281 166 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 ZNF443Q9Y2A4 671 aaPredicted RBP6.47□□□□□ -1.37
USP39-219ENST00000496047 TMEM5Q9Y2B1 443 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 PCDHGA6Q9Y5G7 932 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 SNX11Q9Y5W9 270 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 CSNK1G3Q9Y6M4 447 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 DSPPQ9NZW4 1301 aa6.47□□□□□ -1.37
USP39-219ENST00000496047 CHD6Q8TD26 2715 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 LOC105369274A0A096LPK9 316 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 LOC102723532A0A0G2JNH3 316 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 SH3PXD2BA1X283 911 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 SLC9B1P1A6NJY1 282 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 SHISA7A6NL88 538 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 CLCA1A8K7I4 914 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 H0YIG0 161 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 H3BMQ9 156 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 PCDH17O14917 1159 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 XPNPEP2O43895 674 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 FGF17O60258 216 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 LDB3O75112 727 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 PIAS2O75928 621 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 FADS2O95864 444 aaKnown RBP6.46□□□□□ -1.38
USP39-219ENST00000496047 MT-ND2P03891 347 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 CELA2BP08218 269 aaPredicted RBP6.46□□□□□ -1.38
USP39-219ENST00000496047 PIPP12273 146 aaPredicted RBP6.46□□□□□ -1.38
USP39-219ENST00000496047 POU2F1P14859 743 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 IL9P15248 144 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 DUSP8Q13202 625 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 ILKQ13418 452 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 PTGES3Q15185 160 aaKnown RBP6.46□□□□□ -1.38
USP39-219ENST00000496047 PRICKLE4Q2TBC4 344 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 DEFB110Q30KQ9 67 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 ZNF750Q32MQ0 723 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 INAVAQ3KP66 663 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 YOD1Q5VVQ6 348 aaPredicted RBP6.46□□□□□ -1.38
USP39-219ENST00000496047 SLX4IPQ5VYV7 408 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 TCTN3Q6NUS6 607 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 FAM111BQ6SJ93 734 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 KLHL17Q6TDP4 642 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 CD300LDQ6UXZ3 194 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 ZNF367Q7RTV3 350 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 P2RY8Q86VZ1 359 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 HEATR5AQ86XA9 2040 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 ZNF761Q86XN6 746 aaPredicted RBP6.46□□□□□ -1.38
USP39-219ENST00000496047 KMT5CQ86Y97 462 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 ANKRD13BQ86YJ7 626 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 CROCCP3Q8IVE0 287 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 GPR135Q8IZ08 494 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 OR4N4Q8N0Y3 316 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 OR4K5Q8NGD3 323 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 OR52L1Q8NGH7 329 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 OR8J1Q8NGP2 316 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 GPR151Q8TDV0 419 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 OIT3Q8WWZ8 545 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 KLHL6Q8WZ60 621 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 TMIGD2Q96BF3 282 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 MVB12AQ96EY5 273 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 GIMAP5Q96F15 307 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 RBM18Q96H35 190 aaKnown RBP6.46□□□□□ -1.38
USP39-219ENST00000496047 ART5Q96L15 291 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 COG8Q96MW5 612 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 CNTNAP3BQ96NU0 1288 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 CSF3RQ99062 836 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 MCHR1Q99705 422 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 BARD1Q99728 777 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms