RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CYP27C1Q4G0S4 372 aa21.01■□□□□ 0.95
COL27A1-208ENST00000494780 FADS6Q8N9I5 356 aa21.01■□□□□ 0.95
COL27A1-208ENST00000494780 SDHAF3Q9NRP4 125 aa21.01■□□□□ 0.95
COL27A1-208ENST00000494780 TESMINQ9Y4I5 508 aa21.01■□□□□ 0.95
COL27A1-208ENST00000494780 TIMM22Q9Y584 194 aa21.01■□□□□ 0.95
COL27A1-208ENST00000494780 A0A087WV62 115 aa21■□□□□ 0.95
COL27A1-208ENST00000494780 CPOXP36551 454 aa21■□□□□ 0.95
COL27A1-208ENST00000494780 EEFSECP57772 596 aaKnown RBP21■□□□□ 0.95
COL27A1-208ENST00000494780 BTKQ06187 659 aa21■□□□□ 0.95
COL27A1-208ENST00000494780 BIVMQ86UB2 503 aa21■□□□□ 0.95
COL27A1-208ENST00000494780 MEIOBQ8N635 442 aa21■□□□□ 0.95
COL27A1-208ENST00000494780 STARD4Q96DR4 205 aa21■□□□□ 0.95
COL27A1-208ENST00000494780 DSN1Q9H410 356 aa21■□□□□ 0.95
COL27A1-208ENST00000494780 GRID1Q9ULK0 1009 aa21■□□□□ 0.95
COL27A1-208ENST00000494780 ABCG2Q9UNQ0 655 aa21■□□□□ 0.95
COL27A1-208ENST00000494780 SLC22A20A6NK97 555 aa20.99■□□□□ 0.95
COL27A1-208ENST00000494780 SCO2O43819 266 aa20.99■□□□□ 0.95
COL27A1-208ENST00000494780 FADS1O60427 444 aa20.99■□□□□ 0.95
COL27A1-208ENST00000494780 ZNF763Q0D2J5 394 aa20.99■□□□□ 0.95
COL27A1-208ENST00000494780 C2orf80Q0P641 193 aa20.99■□□□□ 0.95
COL27A1-208ENST00000494780 GANABQ14697 944 aaKnown RBP20.99■□□□□ 0.95
COL27A1-208ENST00000494780 OR2M3Q8NG83 312 aa20.99■□□□□ 0.95
COL27A1-208ENST00000494780 ACMSDQ8TDX5 336 aa20.99■□□□□ 0.95
COL27A1-208ENST00000494780 KCNA7Q96RP8 456 aa20.99■□□□□ 0.95
COL27A1-208ENST00000494780 C19orf53Q9UNZ5 99 aaPredicted RBP20.99■□□□□ 0.95
COL27A1-208ENST00000494780 C17orf51A8MQB3 221 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 LINC01387J3KSC0 135 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 SMNDC1O75940 238 aaKnown RBP eCLIP20.98■□□□□ 0.957e-6■□□□□ 8.6
COL27A1-208ENST00000494780 JUNP05412 331 aaKnown RBP20.98■□□□□ 0.95
COL27A1-208ENST00000494780 GSTA1P08263 222 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 HK1P19367 917 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 MC3RP41968 323 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 NCBP2P52298 156 aaKnown RBP eCLIP20.98■□□□□ 0.95
COL27A1-208ENST00000494780 FAM27E3Q08E93 113 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 SPDYAQ5MJ70 313 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 SH2D4BQ5SQS7 431 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 SHEQ5VZ18 495 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 TRMT10CQ7L0Y3 403 aaKnown RBP20.98■□□□□ 0.95
COL27A1-208ENST00000494780 UBQLNLQ8IYU4 475 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 CNEP1R1Q8N9A8 125 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 C18orf12Q96KH6 178 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 GSTO2Q9H4Y5 243 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 MIEF1Q9NQG6 463 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 TAS2R7Q9NYW3 318 aa20.98■□□□□ 0.95
COL27A1-208ENST00000494780 WBP11Q9Y2W2 641 aaKnown RBP20.98■□□□□ 0.95
COL27A1-208ENST00000494780 TNFRSF21O75509 655 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 CD79BP40259 229 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 NKX6-1P78426 367 aaPredicted RBP20.97■□□□□ 0.95
COL27A1-208ENST00000494780 DECR1Q16698 335 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 PRSS53Q2L4Q9 553 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 RAET1LQ5VY80 246 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 FAM71E1Q6IPT2 247 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 VWA1Q6PCB0 445 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 TMEM107Q6UX40 140 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 CXorf67Q86X51 503 aaPredicted RBP20.97■□□□□ 0.95
COL27A1-208ENST00000494780 KRTAP1-3Q8IUG1 177 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 CNPY4Q8N129 248 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 CDC26Q8NHZ8 85 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.97■□□□□ 0.95
COL27A1-208ENST00000494780 PGM2Q96G03 612 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 PTGES2Q9H7Z7 377 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 Q9N2J8 555 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 MID1IP1Q9NPA3 183 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 MYNNQ9NPC7 610 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 FAM120CQ9NX05 1096 aaKnown RBP20.97■□□□□ 0.95
COL27A1-208ENST00000494780 ZNF226Q9NYT6 803 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 MED11Q9P086 117 aa20.97■□□□□ 0.95
COL27A1-208ENST00000494780 MRTO4Q9UKD2 239 aaKnown RBP20.97■□□□□ 0.95
COL27A1-208ENST00000494780 CTIFO43310 598 aaKnown RBP20.96■□□□□ 0.95
COL27A1-208ENST00000494780 PSMG1O95456 288 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 NTSP30990 170 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 CLK3P49761 638 aaKnown RBP20.96■□□□□ 0.95
COL27A1-208ENST00000494780 CLDN15P56746 228 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 IMPG1Q17R60 797 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 ZNF474Q6S9Z5 364 aaPredicted RBP20.96■□□□□ 0.95
COL27A1-208ENST00000494780 BTLAQ7Z6A9 289 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 OR2L13Q8N349 312 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 FAM76AQ8TAV0 307 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 FIG4Q92562 907 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 ZNF592Q92610 1267 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 CCDC126Q96EE4 140 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 WFIKKN1Q96NZ8 548 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 FAM111AQ96PZ2 611 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 ELOVL5Q9NYP7 299 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 DCDC2Q9UHG0 476 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 ZNF337Q9Y3M9 751 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 ZNF175Q9Y473 711 aa20.96■□□□□ 0.95
COL27A1-208ENST00000494780 GOLGA8RI6L899 631 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 UPK1AO00322 258 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 UBFD1O14562 309 aaKnown RBP20.95■□□□□ 0.94
COL27A1-208ENST00000494780 RIPK2O43353 540 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 IL33O95760 270 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 KIR2DL2P43627 348 aaPredicted RBP20.95■□□□□ 0.94
COL27A1-208ENST00000494780 SUCLG1P53597 346 aaKnown RBP20.95■□□□□ 0.94
COL27A1-208ENST00000494780 PSMD4P55036 377 aaKnown RBP20.95■□□□□ 0.94
COL27A1-208ENST00000494780 FOXA1P55317 472 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 NAA20P61599 178 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 FGFBP1Q14512 234 aa20.95■□□□□ 0.94
COL27A1-208ENST00000494780 ZNHIT3Q15649 155 aaPredicted RBP20.95■□□□□ 0.94
COL27A1-208ENST00000494780 GLYR1Q49A26 553 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms