RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 EFNA3P52797 238 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 RPS6P62753 249 aaKnown RBP3.43□□□□□ -1.86
NCL-210ENST00000494618 SRYQ05066 204 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 C2orf76Q3KRA6 126 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 SPATA46Q5T0L3 261 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 UFSP1Q6NVU6 142 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 TRPM8Q7Z2W7 1104 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 ADAMTS16Q8TE57 1224 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 ANKRD49Q8WVL7 239 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 CCDC43Q96MW1 224 aaKnown RBP3.43□□□□□ -1.86
NCL-210ENST00000494618 FTHL17Q9BXU8 183 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 HES7Q9BYE0 225 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 CARD9Q9H257 536 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 MID1IP1Q9NPA3 183 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 MYOZ2Q9NPC6 264 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 MEPEQ9NQ76 525 aaPredicted RBP3.43□□□□□ -1.86
NCL-210ENST00000494618 NOTCH2Q04721 2471 aa3.43□□□□□ -1.86
NCL-210ENST00000494618 E9PLD3 99 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 H3BMH7 237 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 ANP32DO95626 131 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 PNPP00491 289 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 IGKV3-11P04433 115 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 PGK2P07205 417 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 ZNF853P0CG23 659 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 CYP11B1P15538 503 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 GABRR1P24046 479 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 COPB2P35606 906 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 EMDP50402 254 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 C17orf67Q0P5P2 114 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 RPA4Q13156 261 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 KCNJ11Q14654 390 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 CYBRD1Q53TN4 286 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 LIPKQ5VXJ0 399 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 ZNF57Q68EA5 555 aaPredicted RBP3.42□□□□□ -1.86
NCL-210ENST00000494618 OR5M10Q6IEU7 315 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 TIFABQ6ZNK6 161 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 OR10H4Q8NGA5 316 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 WDR36Q8NI36 951 aaKnown RBP3.42□□□□□ -1.86
NCL-210ENST00000494618 C18orf25Q96B23 403 aaPredicted RBP3.42□□□□□ -1.86
NCL-210ENST00000494618 COQ7Q99807 217 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 EBF4Q9BQW3 602 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 CNPY3Q9BT09 278 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 PTGES2Q9H7Z7 377 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 GHRLQ9UBU3 117 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 TRIM10Q9UDY6 481 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 BCAP29Q9UHQ4 241 aa3.42□□□□□ -1.86
NCL-210ENST00000494618 COL4A4P53420 1690 aaPredicted RBP3.42□□□□□ -1.86
NCL-210ENST00000494618 DHX29Q7Z478 1369 aaKnown RBP3.41□□□□□ -1.86
NCL-210ENST00000494618 DHRS7CA6NNS2 312 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 ZNF861PO60384 105 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 KINO60870 393 aaKnown RBP3.41□□□□□ -1.86
NCL-210ENST00000494618 ABHD2P08910 425 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 ZNF17P17021 662 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 ZNF32P17041 273 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 CDH5P33151 784 aaPredicted RBP3.41□□□□□ -1.86
NCL-210ENST00000494618 SRP54P61011 504 aaKnown RBP3.41□□□□□ -1.86
NCL-210ENST00000494618 DPYSQ14117 519 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 IL17AQ16552 155 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 CCDC14Q49A88 953 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 ZNF658BQ4V348 819 aaPredicted RBP3.41□□□□□ -1.86
NCL-210ENST00000494618 AGKQ53H12 422 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 OR2B11Q5JQS5 317 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 DCST2Q5T1A1 773 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 KHDRBS2Q5VWX1 349 aaKnown RBP3.41□□□□□ -1.86
NCL-210ENST00000494618 PNCKQ6P2M8 343 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 LEG1Q6P5S2 330 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 VPS36Q86VN1 386 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 MKXQ8IYA7 352 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 TMEM185AQ8NFB2 350 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 MCHR2Q969V1 340 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 ZNF184Q99676 751 aaPredicted RBP3.41□□□□□ -1.86
NCL-210ENST00000494618 NICN1Q9BSH3 213 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 RBM28Q9NW13 759 aaKnown RBP3.41□□□□□ -1.86
NCL-210ENST00000494618 EXOSC1Q9Y3B2 195 aaKnown RBP3.41□□□□□ -1.86
NCL-210ENST00000494618 CDC42BPBQ9Y5S2 1711 aa3.41□□□□□ -1.86
NCL-210ENST00000494618 ANKRD30BQ9BXX2 1392 aa3.4□□□□□ -1.86
NCL-210ENST00000494618 TMEM89A2RUT3 159 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 PANO1I0J062 215 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 LATO43561 262 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 TBL1XO60907 577 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 LYPLA1O75608 230 aaPredicted RBP3.4□□□□□ -1.87
NCL-210ENST00000494618 FUT3P21217 361 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 OC90Q02509 493 aaPredicted RBP3.4□□□□□ -1.87
NCL-210ENST00000494618 HFEQ30201 348 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 IL23RQ5VWK5 629 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 SLX4IPQ5VYV7 408 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 IGFL3Q6UXB1 125 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 HACD2Q6Y1H2 254 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 FRA10AC1Q70Z53 315 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 HSD17B13Q7Z5P4 300 aaPredicted RBP3.4□□□□□ -1.87
NCL-210ENST00000494618 NET1Q7Z628 596 aaPredicted RBP3.4□□□□□ -1.87
NCL-210ENST00000494618 CNTN4Q8IWV2 1026 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 LINC01555Q8NAE3 123 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 BBS1Q8NFJ9 593 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 SMIM14Q96QK8 99 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 CYP39A1Q9NYL5 469 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 ZNF490Q9ULM2 529 aaPredicted RBP3.4□□□□□ -1.87
NCL-210ENST00000494618 L3MBTL1Q9Y468 752 aa3.4□□□□□ -1.87
NCL-210ENST00000494618 GTF3C1Q12789 2109 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms