RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PKDCCQ504Y2 493 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 ABHD17BQ5VST6 288 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 OR9Q2Q8NGE9 314 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 C3orf30Q96M34 536 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 KCNIP1Q9NZI2 227 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 COPZ2Q9P299 210 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 KIR2DS3Q14952 304 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 CCDC28AQ8IWP9 274 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 ANKLE1Q8NAG6 615 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 GPR26Q8NDV2 337 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 GPN2Q9H9Y4 310 aaPredicted RBP18.13■□□□□ 0.49
COL27A1-207ENST00000494090 TAS2R8Q9NYW2 309 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 USP3Q9Y6I4 520 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 MEGF11A6BM72 1044 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 RAB3BP20337 219 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 EIF2S3LQ2VIR3 472 aaKnown RBP18.13■□□□□ 0.49
COL27A1-207ENST00000494090 PLBD1Q6P4A8 553 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 TMEM68Q96MH6 324 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 ATOH8Q96SQ7 321 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 FZD3Q9NPG1 666 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 ICKQ9UPZ9 632 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 HIF3AQ9Y2N7 669 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 A8MVJ9 347 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 IL1RNP18510 177 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 PRPS1P60891 318 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 UEVLDQ8IX04 471 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 SPARTQ8N0X7 666 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 OR52E2Q8NGJ4 325 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 NDNFQ8TB73 568 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 WDR20Q8TBZ3 569 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 DMRT3Q9NQL9 472 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 SRPK3Q9UPE1 567 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 MMP2P08253 660 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 OPRL1P41146 370 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 BORAQ6PGQ7 559 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 ANKK1Q8NFD2 765 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 ZBED3Q96IU2 234 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-207ENST00000494090 SYT4Q9H2B2 425 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 RAB9BQ9NP90 201 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 PNMTP11086 282 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 ITGAMP11215 1152 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 RPS26P11Q5JNZ5 115 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-207ENST00000494090 MARCH8Q5T0T0 291 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 DPPA4Q7L190 304 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 OR4N5Q8IXE1 308 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 ACPTQ9BZG2 426 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 KIR2DS5A0A0G2JLQ3 304 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 A0A0G2JNG1 304 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 KIR2DS3K7RE56 304 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 DDCP20711 480 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 WNT4P56705 351 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 KIR2DS5Q14953 304 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 ARHGAP19Q14CB8 494 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 ATXN7L3Q14CW9 347 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-207ENST00000494090 ZNF542PQ5EBM4 170 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 COQ8AQ8NI60 647 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 KLF16Q9BXK1 252 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-207ENST00000494090 FAM86C1Q9NVL1 165 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 MGAT4CQ9UBM8 478 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 GGT3PA6NGU5 568 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 EDIL3O43854 480 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 BRINP1O60477 761 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 DNAJB6O75190 326 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 ART1P52961 327 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 BCL2L15Q5TBC7 163 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 HMBOX1Q6NT76 420 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.12■□□□□ 0.493e-6■■■□□ 16.7
COL27A1-207ENST00000494090 UBQLNLQ8IYU4 475 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 CHDHQ8NE62 594 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-207ENST00000494090 PHOSPHO2Q8TCD6 241 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 CREB3L4Q8TEY5 395 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 CIDECQ96AQ7 238 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-207ENST00000494090 FBXL3Q9UKT7 428 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 ZNF175Q9Y473 711 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 CEPT1Q9Y6K0 416 aa18.12■□□□□ 0.49
COL27A1-207ENST00000494090 FUOMA2VDF0 154 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 ADRA1AP35348 466 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 IQCF1Q8N6M8 205 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 OTX2P32243 289 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 GRIN2CQ14957 1233 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 SLC39A11Q8N1S5 342 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 SYNPOQ8N3V7 929 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 C3orf58Q8NDZ4 430 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 ARRDC2Q8TBH0 407 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 CACNG6Q9BXT2 260 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 CPEB1Q9BZB8 566 aaKnown RBP18.11■□□□□ 0.49
COL27A1-207ENST00000494090 GPR52Q9Y2T5 361 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 A0A1W2PQL4 384 aaPredicted RBP18.11■□□□□ 0.49
COL27A1-207ENST00000494090 CDKN2CP42773 168 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 FGL1Q08830 312 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 EFR3AQ14156 821 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 ZNF791Q3KP31 576 aaPredicted RBP18.11■□□□□ 0.49
COL27A1-207ENST00000494090 PLAG1Q6DJT9 500 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 PDZD3Q86UT5 571 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 TMEM173Q86WV6 379 aaPredicted RBP18.11■□□□□ 0.49
COL27A1-207ENST00000494090 DTX3Q8N9I9 347 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 LSM14AQ8ND56 463 aaKnown RBP18.11■□□□□ 0.49
COL27A1-207ENST00000494090 DNAAF1Q8NEP3 725 aa18.11■□□□□ 0.49
COL27A1-207ENST00000494090 SPRYD4Q8WW59 207 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms