RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 OR5M3Q8NGP4 307 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 ZCCHC14Q8WYQ9 949 aaKnown RBP17.88■□□□□ 0.45
USP39-218ENST00000493829 ASB9Q96DX5 294 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 TRNT1Q96Q11 434 aaKnown RBP17.88■□□□□ 0.45
USP39-218ENST00000493829 ING2Q9H160 280 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 WDR45Q9Y484 360 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 V9GYQ6 96 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 ZFHX4Q86UP3 3567 aa17.88■□□□□ 0.45
USP39-218ENST00000493829 REM1O75628 298 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 NADKO95544 446 aaPredicted RBP17.87■□□□□ 0.45
USP39-218ENST00000493829 ATP6V1C1P21283 382 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 KRT20P35900 424 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 TLE3Q04726 772 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 TRIM25Q14258 630 aaKnown RBP17.87■□□□□ 0.45
USP39-218ENST00000493829 CYP27C1Q4G0S4 372 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 GLYATQ6IB77 296 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 FRRS1Q6ZNA5 592 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 LRRC69Q6ZNQ3 347 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 RPS19BP1Q86WX3 136 aaKnown RBP17.87■□□□□ 0.45
USP39-218ENST00000493829 TAGAPQ8N103 731 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 SLC34A3Q8N130 599 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 TMEM102Q8N9M5 508 aaPredicted RBP17.87■□□□□ 0.45
USP39-218ENST00000493829 C17orf47Q8NEP4 570 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 SLC22A8Q8TCC7 542 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 TP53INP1Q96A56 240 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 RASL10BQ96S79 203 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 ADOQ96SZ5 270 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 ZNF350Q9GZX5 532 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 SLC38A1Q9H2H9 487 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 MAGEL2Q9UJ55 1249 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 IGF2RP11717 2491 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 CFAP73A6NFT4 308 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 ACOX3O15254 700 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 GMNNO75496 209 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 STX11O75558 287 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 PGM3O95394 542 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 AK1P00568 194 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 ALPPP05187 535 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 FLOT2Q14254 428 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 GNA13Q14344 377 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 FLYWCH1Q4VC44 716 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 IRAK1BP1Q5VVH5 260 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 BROXQ5VW32 411 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 TYW3Q6IPR3 259 aaKnown RBP17.87■□□□□ 0.45
USP39-218ENST00000493829 DHFR2Q86XF0 187 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 SPPL2CQ8IUH8 684 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 GALNT16Q8N428 558 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 BHLHE22Q8NFJ8 381 aaPredicted RBP17.87■□□□□ 0.45
USP39-218ENST00000493829 BBS10Q8TAM1 723 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 PSMF1Q92530 271 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 HSPBAP1Q96EW2 488 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 COL21A1Q96P44 957 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 LHPPQ9H008 270 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 ZBTB20Q9HC78 741 aaPredicted RBP17.87■□□□□ 0.45
USP39-218ENST00000493829 FLRT3Q9NZU0 649 aa17.87■□□□□ 0.45
USP39-218ENST00000493829 CENPVL1A0A0U1RR11 272 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 TO15178 435 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 GCM2O75603 506 aaPredicted RBP17.86■□□□□ 0.45
USP39-218ENST00000493829 SOX3P41225 446 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 POLE2P56282 527 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 MLF1P58340 268 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 VEZF1Q14119 521 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 ERMP1Q7Z2K6 904 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 PTRH1Q86Y79 214 aaKnown RBP17.86■□□□□ 0.45
USP39-218ENST00000493829 ZNF614Q8N883 585 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 FAM13CQ8NE31 585 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 OR10Q1Q8NGQ4 319 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 WDR60Q8WVS4 1066 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 ANKRD10Q9NXR5 420 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 GPR83Q9NYM4 423 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 NPFFR2Q9Y5X5 522 aa17.86■□□□□ 0.45
USP39-218ENST00000493829 ACOT8O14734 319 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 KIAA0513O60268 411 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 STAMBPO95630 424 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 IL33O95760 270 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 F10P00742 488 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 SERPINA1P01009 418 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 CCL11P51671 97 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 FBXW4P57775 412 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 AP2B1P63010 937 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 FXNQ16595 210 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 CRTC2Q53ET0 693 aaPredicted RBP17.85■□□□□ 0.45
USP39-218ENST00000493829 INTS11Q5TA45 600 aaKnown RBP17.85■□□□□ 0.45
USP39-218ENST00000493829 JMJD6Q6NYC1 403 aaPredicted RBP17.85■□□□□ 0.45
USP39-218ENST00000493829 LRRC74BQ6ZQY2 392 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 SLC30A8Q8IWU4 369 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 LRGUKQ96M69 825 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 G6PC3Q9BUM1 346 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 CALML5Q9NZT1 146 aa17.85■□□□□ 0.45
USP39-218ENST00000493829 UGT2B11O75310 529 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 OR6B1O95007 311 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 ZNF682O95780 498 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 CYP4B1P13584 511 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 SSR4P51571 173 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 CRYBA2P53672 197 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 PCBP3P57721 371 aaKnown RBP17.84■□□□□ 0.45
USP39-218ENST00000493829 KPNB1Q14974 876 aaKnown RBP17.84■□□□□ 0.45
USP39-218ENST00000493829 ACER2Q5QJU3 275 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 LINC00696Q6ZRV3 163 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 BEST3Q8N1M1 668 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms