RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 OR7G2Q8NG99 324 aa12.31□□□□□ -0.44
SAMM50-204ENST00000493161 SELENOMQ8WWX9 145 aa12.31□□□□□ -0.44
SAMM50-204ENST00000493161 NANOS1Q8WY41 292 aaKnown RBP12.31□□□□□ -0.44
SAMM50-204ENST00000493161 EXOSC8Q96B26 276 aaKnown RBP12.31□□□□□ -0.44
SAMM50-204ENST00000493161 PFDN4Q9NQP4 134 aa12.31□□□□□ -0.44
SAMM50-204ENST00000493161 ZNF701Q9NV72 531 aaPredicted RBP12.31□□□□□ -0.44
SAMM50-204ENST00000493161 PPP4R1LQ9P1A2 415 aa12.31□□□□□ -0.44
SAMM50-204ENST00000493161 RNF14Q9UBS8 474 aa12.31□□□□□ -0.44
SAMM50-204ENST00000493161 PSME2Q9UL46 239 aa12.31□□□□□ -0.44
SAMM50-204ENST00000493161 PROCRQ9UNN8 238 aa12.31□□□□□ -0.44
SAMM50-204ENST00000493161 ATRQ13535 2644 aa12.31□□□□□ -0.44
SAMM50-204ENST00000493161 OR2M5A3KFT3 312 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 STX16-NPEPL1H3BU86 382 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 STX16O14662 325 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 FADS1O60427 444 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 IL3P08700 152 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 EVI2BP34910 448 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 KRT20P35900 424 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 SLC6A8P48029 635 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 PNLIPRP2P54317 469 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 RAE1P78406 368 aaKnown RBP12.3□□□□□ -0.44
SAMM50-204ENST00000493161 PRSS53Q2L4Q9 553 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 ZNF704Q6ZNC4 412 aaPredicted RBP12.3□□□□□ -0.44
SAMM50-204ENST00000493161 SPATA4Q8NEY3 305 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 FAIM2Q9BWQ8 316 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 XPR1Q9UBH6 696 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 CLEC4AQ9UMR7 237 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 PCNX3Q9H6A9 2034 aa12.3□□□□□ -0.44
SAMM50-204ENST00000493161 RNF223E7ERA6 249 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 GMFGO60234 142 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 BCAS2O75934 225 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-204ENST00000493161 SOX30O94993 753 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 OR4F21O95013 312 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 ESRRBO95718 433 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 RPS17P08708 135 aaKnown RBP12.29□□□□□ -0.44
SAMM50-204ENST00000493161 SBK3P0C264 359 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 SERPINB8P50452 374 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 ATP5J2P56134 94 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 TRA2BP62995 288 aaKnown RBP12.29□□□□□ -0.44
SAMM50-204ENST00000493161 PSG6Q00889 435 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 C10orf62Q5T681 223 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-204ENST00000493161 STAC2Q6ZMT1 411 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 SH2D5Q6ZV89 423 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 FAM214BQ7L5A3 538 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 MARCH3Q86UD3 253 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 GBP7Q8N8V2 638 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-204ENST00000493161 UHMK1Q8TAS1 419 aaKnown RBP12.29□□□□□ -0.44
SAMM50-204ENST00000493161 ZNF483Q8TF39 744 aaPredicted RBP12.29□□□□□ -0.44
SAMM50-204ENST00000493161 DUSP19Q8WTR2 217 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 TMEM171Q8WVE6 324 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 MTBPQ96DY7 904 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 PLPPR2Q96GM1 343 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 BRF2Q9HAW0 419 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 ZNF175Q9Y473 711 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 OR10H1Q9Y4A9 318 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 USF3Q68DE3 2245 aa12.29□□□□□ -0.44
SAMM50-204ENST00000493161 ROS1P08922 2347 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 MANBAO00462 879 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 RBP1P09455 135 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 EEFSECP57772 596 aaKnown RBP12.28□□□□□ -0.44
SAMM50-204ENST00000493161 ERCC6LQ2NKX8 1250 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 BEX5Q5H9J7 111 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 SH2D4BQ5SQS7 431 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 GGNQ86UU5 652 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 WFDC8Q8IUA0 241 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 METTL25Q8N6Q8 603 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 RAB3IL1Q8TBN0 382 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 CAVIN3Q969G5 261 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 ERP27Q96DN0 273 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 C1GALT1C1Q96EU7 318 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 NPAS1Q99742 590 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 TMEM204Q9BSN7 226 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 PLSCR4Q9NRQ2 329 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 VPS29Q9UBQ0 182 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 MCM8Q9UJA3 840 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 SNX6Q9UNH7 406 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 CHD3Q12873 2000 aaKnown RBP12.28□□□□□ -0.44
SAMM50-204ENST00000493161 MXRA5Q9NR99 2828 aa12.28□□□□□ -0.44
SAMM50-204ENST00000493161 STAB1Q9NY15 2570 aa12.27□□□□□ -0.44
SAMM50-204ENST00000493161 CUBNO60494 3623 aa12.27□□□□□ -0.44
SAMM50-204ENST00000493161 ESYT3A0FGR9 886 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 HS3ST1O14792 307 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 PLOD3O60568 738 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 SMIM24O75264 130 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 OTCP00480 354 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 OPN1LWP04000 364 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 MAGEA12P43365 314 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 HTR6P50406 440 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 CAV1Q03135 178 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 ZNF155Q12901 538 aaPredicted RBP12.27□□□□□ -0.45
SAMM50-204ENST00000493161 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.27□□□□□ -0.45
SAMM50-204ENST00000493161 LGSNQ5TDP6 509 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 ALKBH2Q6NS38 261 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 PPP4R4Q6NUP7 873 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 APOOLQ6UXV4 268 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 TMEM151AQ8N4L1 468 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 ZNF611Q8N823 705 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 CDYL2Q8N8U2 506 aa12.27□□□□□ -0.45
SAMM50-204ENST00000493161 LILRB1Q8NHL6 650 aaPredicted RBP12.27□□□□□ -0.45
SAMM50-204ENST00000493161 C16orf78Q8WTQ4 265 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms