RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 HSPA2P54652 639 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ERVK11-1P61568 191 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SEMG2Q02383 582 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 AESQ08117 197 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 FOXE3Q13461 319 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 MED21Q13503 144 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 GRB7Q14451 532 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ACOX1Q15067 660 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 DUSP7Q16829 419 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TATDN3Q17R31 274 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 KCTD19Q17RG1 926 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 QRICH1Q2TAL8 776 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 COL28A1Q2UY09 1125 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PTPN20Q4JDL3 420 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 AKIRIN2Q53H80 203 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 RUNDC3AQ59EK9 446 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TNFAIP8L3Q5GJ75 292 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CERCAMQ5T4B2 595 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SAMD5Q5TGI4 173 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PRAMEF18Q5VWM3 479 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SLX4IPQ5VYV7 408 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 OR2A2Q6IF42 318 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ACSM6Q6P461 480 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 DOK6Q6PKX4 331 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 IL17RELQ6ZVW7 336 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SLC16A14Q7RTX9 510 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SLC22A16Q86VW1 577 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 THOC6Q86W42 341 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SERPINA9Q86WD7 417 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TDRPQ86YL5 185 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 STHQ8IWL8 128 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 Q8N402 240 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CSNK1A1LQ8N752 337 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 MFSD9Q8NBP5 474 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ENGASEQ8NFI3 743 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PROKR1Q8TCW9 393 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TMEM239Q8WW34 195 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SCAMP4Q969E2 229 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 COQ8BQ96D53 544 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 NXPE2Q96DL1 559 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 COX4I2Q96KJ9 171 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CRAMP1Q96RY5 1269 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 MYADMQ96S97 322 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 IL12RB2Q99665 862 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CPNE1Q99829 537 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CCDC3Q9BQI4 270 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ATG101Q9BSB4 218 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 DCUN1D5Q9BTE7 237 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 GTPBP2Q9BX10 602 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TSSK1BQ9BXA7 367 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 KRTAP9-8Q9BYQ0 159 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ULBP2Q9BZM5 246 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ACTR6Q9GZN1 396 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TMEM38AQ9H6F2 299 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 KIR3DX1Q9H7L2 352 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 KAT8Q9H7Z6 458 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 RAB9BQ9NP90 201 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PRSS16Q9NQE7 514 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SMOXQ9NWM0 555 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 SIDT1Q9NXL6 827 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ANKRD10Q9NXR5 420 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 TFCP2L1Q9NZI6 479 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 NOP53Q9NZM5 478 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 PAK5Q9P286 719 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 XPR1Q9UBH6 696 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 HACL1Q9UJ83 578 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 KLHL21Q9UJP4 597 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 ALG5Q9Y673 324 aa3.93□□□□□ -1.78
BRCA1-220ENST00000492859 THOC2Q8NI27 1593 aaKnown RBP3.93□□□□□ -1.78
BRCA1-220ENST00000492859 CUX2O14529 1486 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 WRNQ14191 1432 aaPredicted RBP eCLIP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 ANKRD30BQ9BXX2 1392 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 TRBV11-1A0A0K0K1C0 115 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 C9orf170A2RU37 121 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 TRABD2BA6NFA1 517 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 WTIPA6NIX2 430 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 AQP7P3A6NL99 342 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 VSTM2BA6NLU5 285 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 A8MU76 341 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 H0YGN5 161 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 EEF2KO00418 725 aaKnown RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 PTGESO14684 152 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 PRMT5O14744 637 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 ZBTB5O15062 677 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 ZNF749O43361 778 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 SGCEO43556 437 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 PCDH7O60245 1069 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 KIAA0513O60268 411 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 FADS1O60427 444 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 HUS1O60921 280 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 FZD7O75084 574 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 N4BP1O75113 896 aaKnown RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 LRIG2O94898 1065 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 SEC24AO95486 1093 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 CYB5R3P00387 301 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-220ENST00000492859 IFNA21P01568 189 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 IFNGP01579 166 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 GCP02774 474 aa3.92□□□□□ -1.78
BRCA1-220ENST00000492859 ERBB2P04626 1255 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms