RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 LGSNQ5TDP6 509 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 VITQ6UXI7 678 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 HACD2Q6Y1H2 254 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 ZBED8Q8IZ13 594 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 Q8N9G6 341 aaPredicted RBP3.05□□□□□ -1.92
CLK1-213ENST00000492793 FNDC8Q8TC99 324 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 TFB1MQ8WVM0 346 aaKnown RBP3.05□□□□□ -1.92
CLK1-213ENST00000492793 SLC25A36Q96CQ1 311 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 C11orf24Q96F05 449 aaPredicted RBP3.05□□□□□ -1.92
CLK1-213ENST00000492793 SERAC1Q96JX3 654 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 VSTM2LQ96N03 204 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 TBC1D10AQ9BXI6 508 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 FAM120CQ9NX05 1096 aaKnown RBP3.05□□□□□ -1.92
CLK1-213ENST00000492793 ELOVL2Q9NXB9 296 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 RDH8Q9NYR8 311 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 TAS2R3Q9NYW6 316 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 ATXN10Q9UBB4 475 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 ZNF107Q9UII5 783 aaPredicted RBP3.05□□□□□ -1.92
CLK1-213ENST00000492793 FOXJ3Q9UPW0 622 aa3.05□□□□□ -1.92
CLK1-213ENST00000492793 EXOSC1Q9Y3B2 195 aaKnown RBP3.05□□□□□ -1.92
CLK1-213ENST00000492793 NCAPD2Q15021 1401 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 POGZQ7Z3K3 1410 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 A0A0U1RQV5 110 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 BCL2L11O43521 198 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 TOXO94900 526 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 DIRAS3O95661 229 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 APBB3O95704 486 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 IFNB1P01574 187 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 PTMAP06454 111 aaKnown RBP3.04□□□□□ -1.92
CLK1-213ENST00000492793 THRBP10828 461 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 LAMP1P11279 417 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 ANXA3P12429 323 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 AXLP30530 894 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 CD86P42081 329 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 EMDP50402 254 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 SLC25A1P53007 311 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
CLK1-213ENST00000492793 RPS6P62753 249 aaKnown RBP3.04□□□□□ -1.92
CLK1-213ENST00000492793 HTD2P86397 168 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 PLOD1Q02809 727 aaPredicted RBP3.04□□□□□ -1.92
CLK1-213ENST00000492793 PAX2Q02962 417 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 SCGB2A2Q13296 93 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 TGIF1Q15583 401 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 GSG1Q2KHT4 349 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 LEG1Q6P5S2 330 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 GCNT7Q6ZNI0 430 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 LRRC70Q7Z2Q7 622 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 STKLD1Q8NE28 680 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 UPRTQ96BW1 309 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 C16orf45Q96MC5 204 aaPredicted RBP3.04□□□□□ -1.92
CLK1-213ENST00000492793 VPS35Q96QK1 796 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 RANBP9Q96S59 729 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 FICDQ9BVA6 458 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 ELOVL4Q9GZR5 314 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 LPAR2Q9HBW0 351 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 POLD4Q9HCU8 107 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 SLC7A10Q9NS82 523 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 RBM28Q9NW13 759 aaKnown RBP3.04□□□□□ -1.92
CLK1-213ENST00000492793 VSIG4Q9Y279 399 aa3.04□□□□□ -1.92
CLK1-213ENST00000492793 FBLL1A6NHQ2 334 aaKnown RBP3.03□□□□□ -1.92
CLK1-213ENST00000492793 FAM74A7A6NL05 159 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 C19orf81C9J6K1 198 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 PHOX2AO14813 284 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 NOL4O94818 638 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 GJB5O95377 273 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 AK1P00568 194 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 CALCBP10092 127 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 NCF1P14598 390 aaPredicted RBP3.03□□□□□ -1.92
CLK1-213ENST00000492793 DPP4P27487 766 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 GDF1P27539 372 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 CYLC1P35663 651 aaPredicted RBP3.03□□□□□ -1.92
CLK1-213ENST00000492793 DLSTP36957 453 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 GNPDA1P46926 289 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 KRTAP10-6P60371 365 aaPredicted RBP3.03□□□□□ -1.92
CLK1-213ENST00000492793 CD47Q08722 323 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 CAMK4Q16566 473 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 TTC31Q49AM3 519 aaPredicted RBP3.03□□□□□ -1.92
CLK1-213ENST00000492793 FAM74A3Q4VXF1 159 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 SPINK14Q6IE38 97 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 AFTPHQ6ULP2 937 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 CCBE1Q6UXH8 406 aaPredicted RBP3.03□□□□□ -1.92
CLK1-213ENST00000492793 C2orf66Q6UXQ4 117 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 CATSPER4Q7RTX7 472 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 MARCH9Q86YJ5 346 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 GCNT2Q8N0V5 402 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 KLHL30-AS1Q8NEE0 82 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 NFAM1Q8NET5 270 aaPredicted RBP3.03□□□□□ -1.92
CLK1-213ENST00000492793 SDSLQ96GA7 329 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 DHTKD1Q96HY7 919 aaPredicted RBP3.03□□□□□ -1.92
CLK1-213ENST00000492793 HCAR1Q9BXC0 346 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 ECT2Q9H8V3 914 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 MIEF1Q9NQG6 463 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 EXOSC3Q9NQT5 275 aaKnown RBP3.03□□□□□ -1.92
CLK1-213ENST00000492793 POLE3Q9NRF9 147 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 UTP6Q9NYH9 597 aaKnown RBP3.03□□□□□ -1.92
CLK1-213ENST00000492793 KIF3AQ9Y496 699 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 AP4B1Q9Y6B7 739 aa3.03□□□□□ -1.92
CLK1-213ENST00000492793 USP6P35125 1406 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 AGRNO00468 2067 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms