RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, human

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-215	ENST00000492417	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	BRF2	Q9HAW0	419 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	TMEM27	Q9HBJ8	222 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	TMEM138	Q9NPI0	162 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	FAM120C	Q9NX05	1096 aa	Known RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	NKIRAS2	Q9NYR9	191 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	COMMD9	Q9P000	198 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SUCO	Q9UBS9	1254 aa	Known RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	DAPP1	Q9UN19	280 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	GTF2A1L	Q9UNN4	478 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ERGIC3	Q9Y282	383 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	PTPRD	P23468	1912 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ZSCAN5B	A6NJL1	495 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	BBIP1	A8MTZ0	92 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	IGLV3-19	P01714	112 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	C1QA	P02745	245 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417		P04436	131 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CTSB	P07858	339 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	YES1	P07947	543 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ALDOC	P09972	364 aa	Known RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SAG	P10523	405 aa	Predicted RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CPM	P14384	443 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	DDC	P20711	480 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SDHB	P21912	280 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	OR1E2	P47887	323 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SLC9A3	P48764	834 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	PER3	P56645	1201 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	OR2B6	P58173	313 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	GMFB	P60983	142 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	LSAMP	Q13449	338 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	DNASE1L3	Q13609	305 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	RUNX2	Q13950	521 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	MED22	Q15528	200 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ZIC1	Q15915	447 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	NDUFAF6	Q330K2	333 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ZNF528	Q3MIS6	628 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ZBED5	Q49AG3	693 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	TNFAIP8L3	Q5GJ75	292 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	PAGE3	Q5JUK9	113 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	FCRL6	Q6DN72	434 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	LANCL3	Q6ZV70	420 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ARMC8	Q8IUR7	673 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ELMOD2	Q8IZ81	293 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	KLHL6	Q8WZ60	621 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	TANK	Q92844	425 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	PMM1	Q92871	262 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ARSG	Q96EG1	525 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	C16orf58	Q96GQ5	468 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SENP5	Q96HI0	755 aa	Predicted RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	NODAL	Q96S42	347 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	HOPX	Q9BPY8	73 aa	Predicted RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	DOHH	Q9BU89	302 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ADI1	Q9BV57	179 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CCDC86	Q9H6F5	360 aa	Known RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	COQ10B	Q9H8M1	238 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SMPD3	Q9NY59	655 aa	Predicted RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	P2RX2	Q9UBL9	471 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SSR3	Q9UNL2	185 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	VDAC3	Q9Y277	283 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	POLR1D	Q9Y2S0	133 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	TESMIN	Q9Y4I5	508 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	LYVE1	Q9Y5Y7	322 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	TSC2	P49815	1807 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417		A0A1W2PR48	441 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	CXCR6	O00574	342 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	TP53I11	O14683	189 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	FRS3	O43559	492 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	FGF17	O60258	216 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	GALR3	O60755	368 aa	Predicted RBP	4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	OR6B1	O95007	311 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	ANGPTL1	O95841	491 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	ZGLP1	P0C6A0	271 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	PEPD	P12955	493 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	CAPN3	P20807	821 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	PAICS	P22234	425 aa	Known RBP	4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	ADSL	P30566	484 aa	Predicted RBP	4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	ARRB2	P32121	409 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	CSF2RB	P32927	897 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	RCVRN	P35243	200 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	RFC3	P40938	356 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	CDH15	P55291	814 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	TNFRSF17	Q02223	184 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	GBX1	Q14549	363 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	MOG	Q16653	247 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	HMBOX1	Q6NT76	420 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	KRT77	Q7Z794	578 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	LAPTM4B	Q86VI4	370 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	STX12	Q86Y82	276 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	MAML2	Q8IZL2	1156 aa	Predicted RBP	4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	PGAM4	Q8N0Y7	254 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	OR8H3	Q8N146	312 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	SLC5A8	Q8N695	610 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	TEX19	Q8NA77	164 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	FNDC8	Q8TC99	324 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	LRTOMT	Q8WZ04	291 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	ISL2	Q96A47	359 aa		4.19	□□□□□ -1.74
TRA2B-215	ENST00000492417	TM4SF18	Q96CE8	201 aa		4.19	□□□□□ -1.74

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