RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MSTNO14793 375 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 EEF1E1O43324 174 aaKnown RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 HCRTR2O43614 444 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 PLOD3O60568 738 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 UGT2B11O75310 529 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 ERAL1O75616 437 aaKnown RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 BPNT1O95861 308 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 PDYNP01213 254 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 KRT6AP02538 564 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 KRT6BP04259 564 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 INHBAP08476 426 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 ZNF708P17019 499 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 SOX18P35713 384 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 FEN1P39748 380 aaKnown RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 KRT6CP48668 564 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 LHX2P50458 406 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 CKAP4Q07065 602 aaKnown RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 DYNC1I2Q13409 638 aaKnown RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 SNTB1Q13884 538 aaKnown RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 HEPACAMQ14CZ8 416 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 TRADDQ15628 312 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 UAP1Q16222 522 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 TRMT12Q53H54 448 aaKnown RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 ZNF628Q5EBL2 1059 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 DCST1Q5T197 706 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 LGSNQ5TDP6 509 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 GALNT18Q6P9A2 607 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 FAM111BQ6SJ93 734 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 IFNEQ86WN2 208 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 PRR22Q8IZ63 422 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 LRRC75A-AS1Q8N1F1 130 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 PLD6Q8N2A8 252 aaKnown RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 OR52R1Q8NGF1 315 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 LINC01560Q8TB33 94 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 SELENOMQ8WWX9 145 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 SGCDQ92629 289 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 KLHL29Q96CT2 875 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 CNRIP1Q96F85 164 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 C18orf12Q96KH6 178 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 NSRP1Q9H0G5 558 aaKnown RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 SERHLQ9NQF3 203 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 FKBP14Q9NWM8 211 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 TAS2R10Q9NYW0 307 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 NINJ2Q9NZG7 142 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 EHD3Q9NZN3 535 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 CLCF1Q9UBD9 225 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 XPR1Q9UBH6 696 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 PACSIN3Q9UKS6 424 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 PYCARDQ9ULZ3 195 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 EIF3LQ9Y262 564 aaKnown RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 WBP11Q9Y2W2 641 aaKnown RBP8.29□□□□□ -1.08
HDAC3-212ENST00000492407 PLLPQ9Y342 182 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 WIF1Q9Y5W5 379 aa8.29□□□□□ -1.08
HDAC3-212ENST00000492407 SH3D21A4FU49 640 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 NDUFAB1O14561 156 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 ARHGEF9O43307 516 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 TSPAN2O60636 221 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 ULK1O75385 1050 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 REM1O75628 298 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 IFI6P09912 130 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 PEPDP12955 493 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 MPIP34949 423 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 KRT20P35900 424 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 HSD17B3P37058 310 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 SLCO1A2P46721 670 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 CPA2P48052 419 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 DSCR4P56555 118 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-212ENST00000492407 WNT3P56703 355 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 NAA20P61599 178 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 FOXF2Q12947 444 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 GANABQ14697 944 aaKnown RBP8.28□□□□□ -1.08
HDAC3-212ENST00000492407 ERCC6LQ2NKX8 1250 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 GRAMD1BQ3KR37 738 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 GLYR1Q49A26 553 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-212ENST00000492407 CYP27C1Q4G0S4 372 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 SPIN4Q56A73 249 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 C8orf74Q6P047 294 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 PRSS57Q6UWY2 283 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 TIFABQ6ZNK6 161 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 TMEM151AQ8N4L1 468 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 ZBTB8BQ8NAP8 495 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-212ENST00000492407 PIGTQ969N2 578 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 VSTM2LQ96N03 204 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 NSUN5Q96P11 429 aaKnown RBP8.28□□□□□ -1.08
HDAC3-212ENST00000492407 CGREF1Q99674 301 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 SDHAF3Q9NRP4 125 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 GIMAP4Q9NUV9 329 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 GALNT8Q9NY28 637 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 ELOVL5Q9NYP7 299 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 TAS2R9Q9NYW1 312 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 TAS2R7Q9NYW3 318 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 UTS2RQ9UKP6 389 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 TESMINQ9Y4I5 508 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 ZNF469Q96JG9 3925 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-212ENST00000492407 ABCA2Q9BZC7 2435 aa8.28□□□□□ -1.08
HDAC3-212ENST00000492407 PRRC2AP48634 2157 aaKnown RBP8.27□□□□□ -1.09
HDAC3-212ENST00000492407 A0A087WV62 115 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 A0A1W2PNV4 684 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 H3BQF6 201 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms