RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 PEX11AO75192 247 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 SKAP2O75563 359 aaPredicted RBP13.62□□□□□ -0.23
TOM1-215ENST00000491987 IL2RAP01589 272 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 IFI6P09912 130 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 PRPS2P11908 318 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 EFNA1P20827 205 aaPredicted RBP13.62□□□□□ -0.23
TOM1-215ENST00000491987 GABRA3P34903 492 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 TIMP3P35625 211 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 SERPINB5P36952 375 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 ASMTP46597 345 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 PRKAG1P54619 331 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 MANFP55145 182 aaKnown RBP13.62□□□□□ -0.23
TOM1-215ENST00000491987 GFRA1P56159 465 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 SRYQ05066 204 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 ZNF844Q08AG5 666 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 STX5Q13190 355 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 MYBPHQ13203 477 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 PDE7AQ13946 482 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 RCAN2Q14206 197 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 XKR7Q5GH72 579 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 ENPP6Q6UWR7 440 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 TRIM42Q8IWZ5 723 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 NUP43Q8NFH3 380 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 FBXO30Q8TB52 745 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 PIK3R3Q92569 461 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 DTNBP1Q96EV8 351 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 ZBED6CLQ96FA7 236 aaPredicted RBP13.62□□□□□ -0.23
TOM1-215ENST00000491987 PKNOX2Q96KN3 472 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 PPP3R2Q96LZ3 170 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 SFXN2Q96NB2 322 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 TUBA1CQ9BQE3 449 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 DSN1Q9H410 356 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 PPP4R1LQ9P1A2 415 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 ZDHHC2Q9UIJ5 367 aa13.62□□□□□ -0.23
TOM1-215ENST00000491987 RPH3AQ9Y2J0 694 aaPredicted RBP13.62□□□□□ -0.23
TOM1-215ENST00000491987 FREM3P0C091 2139 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 GXYLT2A0PJZ3 443 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 MBD3L4A6NDZ8 208 aaPredicted RBP13.61□□□□□ -0.23
TOM1-215ENST00000491987 MBD3L3A6NE82 208 aaPredicted RBP13.61□□□□□ -0.23
TOM1-215ENST00000491987 MBD3L5A6NJ08 208 aaPredicted RBP13.61□□□□□ -0.23
TOM1-215ENST00000491987 TMEM114B3SHH9 223 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 RGS16O15492 202 aaPredicted RBP13.61□□□□□ -0.23
TOM1-215ENST00000491987 FADS1O60427 444 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 IL33O95760 270 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 CPN1P15169 458 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 DPP4P27487 766 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 MAPK1P28482 360 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 UQCRC1P31930 480 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 HPCAL1P37235 193 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 FRKP42685 505 aaPredicted RBP13.61□□□□□ -0.23
TOM1-215ENST00000491987 ETV4P43268 484 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 STARP49675 285 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 ZNF136P52737 540 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 ATP6AP1LQ52LC2 224 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 POMZP3Q6PJE2 187 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 NUDCD3Q8IVD9 361 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 HOMEZQ8IX15 550 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 C9orf106Q8NAJ2 232 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 OR2M3Q8NG83 312 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 MBD3L2Q8NHZ7 208 aaPredicted RBP13.61□□□□□ -0.23
TOM1-215ENST00000491987 PPP1R14CQ8TAE6 165 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 ZPLD1Q8TCW7 415 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 GPR151Q8TDV0 419 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 SLC9A6Q92581 669 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 ZBTB9Q96C00 473 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 MTERF3Q96E29 417 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 RMND5BQ96G75 393 aaPredicted RBP13.61□□□□□ -0.23
TOM1-215ENST00000491987 C3orf30Q96M34 536 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 ZNF559Q9BR84 538 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 C1orf50Q9BV19 199 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 RTN4RQ9BZR6 473 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 C3orf14Q9HBI5 128 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 FAM120CQ9NX05 1096 aaKnown RBP13.61□□□□□ -0.23
TOM1-215ENST00000491987 KCNN3Q9UGI6 736 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 MRTO4Q9UKD2 239 aaKnown RBP13.61□□□□□ -0.23
TOM1-215ENST00000491987 ABCG2Q9UNQ0 655 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 L3MBTL1Q9Y468 752 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 KIAA1549Q9HCM3 1950 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 ADGRG4Q8IZF6 3080 aa13.61□□□□□ -0.23
TOM1-215ENST00000491987 CREBBPQ92793 2442 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 WDR91A4D1P6 747 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 TTC36A6NLP5 189 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 SCAMP2O15127 329 aaKnown RBP13.6□□□□□ -0.23
TOM1-215ENST00000491987 CTIFO43310 598 aaKnown RBP13.6□□□□□ -0.23
TOM1-215ENST00000491987 NKX2-2O95096 273 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 KCNH1O95259 989 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 IGKV1D-16P01601 117 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 LHX2P50458 406 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 ASCL1P50553 236 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 AGFG1P52594 562 aaKnown RBP13.6□□□□□ -0.23
TOM1-215ENST00000491987 DGKQP52824 942 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 PSMD4P55036 377 aaKnown RBP13.6□□□□□ -0.23
TOM1-215ENST00000491987 SNTB1Q13884 538 aaKnown RBP13.6□□□□□ -0.23
TOM1-215ENST00000491987 VPS26BQ4G0F5 336 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 CES4AQ5XG92 561 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 AAGABQ6PD74 315 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 ARSKQ6UWY0 536 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 PLXDC2Q6UX71 529 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 R3HCC1LQ7Z5L2 792 aaKnown RBP13.6□□□□□ -0.23
TOM1-215ENST00000491987 MARCH3Q86UD3 253 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms