RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 DDX18Q9NVP1 670 aaKnown RBP7.95□□□□□ -1.14
NUP50-217ENST00000491860 FAM120CQ9NX05 1096 aaKnown RBP7.95□□□□□ -1.14
NUP50-217ENST00000491860 PACSIN3Q9UKS6 424 aa7.95□□□□□ -1.14
NUP50-217ENST00000491860 CBLCQ9ULV8 474 aa7.95□□□□□ -1.14
NUP50-217ENST00000491860 C19orf53Q9UNZ5 99 aaPredicted RBP7.95□□□□□ -1.14
NUP50-217ENST00000491860 MED12LQ86YW9 2145 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 CLCA1A8K7I4 914 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 GOLGA8RI6L899 631 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 MSTNO14793 375 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 CASKO14936 926 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 HCRTR2O43614 444 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 SOX30O94993 753 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 KCNH1O95259 989 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 HSPA4LO95757 839 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 RAF1P04049 648 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 FCGR2AP12318 317 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 FOSL1P15407 271 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 ZNF708P17019 499 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 LCN1P31025 176 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 EVI2BP34910 448 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 SOX18P35713 384 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 RPL3P39023 403 aaKnown RBP7.94□□□□□ -1.14
NUP50-217ENST00000491860 LHX2P50458 406 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 RPS3AP61247 264 aaKnown RBP7.94□□□□□ -1.14
NUP50-217ENST00000491860 DUSP2Q05923 314 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 BTKQ06187 659 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 C17orf67Q0P5P2 114 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 TCHHL1Q5QJ38 904 aaPredicted RBP7.94□□□□□ -1.14
NUP50-217ENST00000491860 DCST1Q5T197 706 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 LIPMQ5VYY2 423 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 FAM71E1Q6IPT2 247 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 PAMR1Q6UXH9 720 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 OR2L13Q8N349 312 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 CCDC63Q8NA47 563 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 C9orf106Q8NAJ2 232 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 OR7G2Q8NG99 324 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 CEP70Q8NHQ1 597 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 PIGQQ9BRB3 760 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 CCM2LQ9NUG4 571 aaPredicted RBP7.94□□□□□ -1.14
NUP50-217ENST00000491860 PAQR5Q9NXK6 330 aaPredicted RBP7.94□□□□□ -1.14
NUP50-217ENST00000491860 CLCF1Q9UBD9 225 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 TBK1Q9UHD2 729 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 EIF3LQ9Y262 564 aaKnown RBP7.94□□□□□ -1.14
NUP50-217ENST00000491860 TMED5Q9Y3A6 229 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 ZNF175Q9Y473 711 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 TIMM22Q9Y584 194 aa7.94□□□□□ -1.14
NUP50-217ENST00000491860 PRRC2AP48634 2157 aaKnown RBP7.93□□□□□ -1.14
NUP50-217ENST00000491860 SH3D21A4FU49 640 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 SLC22A20A6NK97 555 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 G3V2L1 256 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 COPEO14579 308 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 TBX19O60806 448 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 TNFRSF21O75509 655 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 PSMG1O95456 288 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 IL33O95760 270 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 PROCP04070 461 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 JUNP05412 331 aaKnown RBP7.93□□□□□ -1.14
NUP50-217ENST00000491860 CPA3P15088 417 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 CHN1P15882 459 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 MC3RP41968 323 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 ASMTP46597 345 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 HTR6P50406 440 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 GAS1P54826 345 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 CLDN18P56856 261 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 CORO7P57737 925 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 PSG6Q00889 435 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 SRYQ05066 204 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 KEAP1Q14145 624 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 NOXRED1Q6NXP6 359 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 FAM180BQ6P0A1 224 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 ZCCHC12Q6PEW1 402 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 TMEM107Q6UX40 140 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 NPSR1Q6W5P4 371 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 R3HCC1LQ7Z5L2 792 aaKnown RBP7.93□□□□□ -1.14
NUP50-217ENST00000491860 MISPQ8IVT2 679 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 NATD1Q8N6N6 113 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 FADS6Q8N9I5 356 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 CDC26Q8NHZ8 85 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.93□□□□□ -1.14
NUP50-217ENST00000491860 MZB1Q8WU39 189 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 GFM2Q969S9 779 aaKnown RBP7.93□□□□□ -1.14
NUP50-217ENST00000491860 EFHD2Q96C19 240 aaPredicted RBP7.93□□□□□ -1.14
NUP50-217ENST00000491860 INTS12Q96CB8 462 aaKnown RBP7.93□□□□□ -1.14
NUP50-217ENST00000491860 TRIM44Q96DX7 344 aaPredicted RBP7.93□□□□□ -1.14
NUP50-217ENST00000491860 MTERF3Q96E29 417 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 ELP4Q96EB1 424 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 ZBED6CLQ96FA7 236 aaPredicted RBP7.93□□□□□ -1.14
NUP50-217ENST00000491860 AMDHD1Q96NU7 426 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 KCNA7Q96RP8 456 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 CCT7Q99832 543 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 SLC39A3Q9BRY0 314 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 LMF2Q9BU23 707 aaKnown RBP7.93□□□□□ -1.14
NUP50-217ENST00000491860 EBPLQ9BY08 206 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 TXLNGYQ9BZA5 131 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 TBL1XR1Q9BZK7 514 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 EML4Q9HC35 981 aaKnown RBP7.93□□□□□ -1.14
NUP50-217ENST00000491860 OXSMQ9NWU1 459 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 C1orf109Q9NX04 203 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 ELOVL5Q9NYP7 299 aa7.93□□□□□ -1.14
NUP50-217ENST00000491860 ZNF226Q9NYT6 803 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms