RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 SLC14A1Q13336 389 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 PAN3Q58A45 887 aaKnown RBP10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 SYT14P1Q58G82 188 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 Q5BKY6 102 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 LRRC73Q5JTD7 316 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 PGAP1Q75T13 922 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 ZER1Q7Z7L7 766 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 OR5D16Q8NGK9 328 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 FBLIM1Q8WUP2 373 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 CPNE2Q96FN4 548 aaPredicted RBP10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 MSLNLQ96KJ4 702 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 ZNF354BQ96LW1 612 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 LINC00052Q96N35 136 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 PTPN18Q99952 460 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 ZNF350Q9GZX5 532 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 ASB6Q9NWX5 421 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 POMT2Q9UKY4 750 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 EVPLQ92817 2033 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 SLC9B1P1A6NJY1 282 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 ITGBL1O95965 494 aaPredicted RBP10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 OR12D2P58182 307 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 XKR4Q5GH76 650 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 COX20Q5RI15 118 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 UBXN11Q5T124 520 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 C18orf63Q68DL7 685 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 TMEM220Q6QAJ8 160 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 TPRG1Q6ZUI0 275 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 BRIX1Q8TDN6 353 aaKnown RBP10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 SMPDL3AQ92484 453 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 ECHDC3Q96DC8 303 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 POTEKPQ9BYX7 375 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 KCNK12Q9HB15 430 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 CSNK1G1Q9HCP0 422 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 SPG21Q9NZD8 308 aa10.67□□□□□ -0.7
CRNKL1-204ENST00000490910 RAB19A4D1S5 217 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 ZNF98A6NK75 572 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 TMEM88BA6NKF7 163 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 PIP5K1CO60331 668 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 UGDHO60701 494 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 MMP2P08253 660 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 PTH2RP49190 550 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 ACTC1P68032 377 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 ACTA1P68133 377 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 MEF2AQ02078 507 aaPredicted RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 TPBGQ13641 420 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 POM121L1PQ3SYA9 428 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 GGTA1PQ4G0N0 100 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 ZNF546Q86UE3 836 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 POGLUT1Q8NBL1 392 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 ZC3HAV1LQ96H79 300 aaKnown RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 SLC38A3Q99624 504 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 SEC22CQ9BRL7 303 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 COMMD4Q9H0A8 199 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 SLC52A3Q9NQ40 469 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 GKN1Q9NS71 199 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 RBPJLQ9UBG7 517 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 MRTO4Q9UKD2 239 aaKnown RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 PADI3Q9ULW8 664 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 GON4LQ3T8J9 2241 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 TRBV2A0A0J9YWF9 115 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 C13orf42A0A1B0GVH6 325 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 A8MVJ9 347 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 RNF13O43567 381 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 OAZ2O95190 189 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 CD9P21926 228 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 MAT2AP31153 395 aaKnown RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 RGRP47804 291 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 MC1RQ01726 317 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 TNFRSF17Q02223 184 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 RING1Q06587 406 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 KRBOX4Q5JUW0 171 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 LAIR1Q6GTX8 287 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 GRHL2Q6ISB3 625 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 FAM180BQ6P0A1 224 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 TMUB2Q71RG4 321 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 ZNF551Q7Z340 670 aaPredicted RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 SLC9B2Q86UD5 537 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 ARMC10Q8N2F6 343 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 C16orf78Q8WTQ4 265 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 SMAP2Q8WU79 429 aaPredicted RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 PLD4Q96BZ4 506 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 TAS2R8Q9NYW2 309 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 CKLFQ9UBR5 152 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 TRAV20A0A0B4J274 112 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 PDHXO00330 501 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 RGS11O94810 467 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 IGFBP1P08833 259 aaPredicted RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 SNRPBP14678 240 aaKnown RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 ELAVL4P26378 380 aaKnown RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 EPHB3P54753 998 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 SEC61A1P61619 476 aaKnown RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 SORDQ00796 357 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 NKAPLQ5M9Q1 402 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 IER5LQ5T953 404 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 CXCL17Q6UXB2 119 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 LIPIQ6XZB0 460 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 CCDC71Q8IV32 467 aaPredicted RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 SERPINA12Q8IW75 414 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 FAM26EQ8N5C1 309 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 ZNF676Q8N7Q3 588 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms