RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 GSX1Q9H4S2 264 aaPredicted RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 PIF1Q9H611 641 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 EPS8L2Q9H6S3 715 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 RPF2Q9H7B2 306 aaKnown RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 CXorf36Q9H7Y0 433 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 TPT1P8Q9HAU6 139 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 ZNF160Q9HCG1 818 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 MS4A12Q9NXJ0 267 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 TAS2R9Q9NYW1 312 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 TRPC4Q9UBN4 977 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 ERRFI1Q9UJM3 462 aaPredicted RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 C3orf18Q9UK00 162 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 PCDHGB4Q9UN71 923 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 CDC14AQ9UNH5 594 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 ENTPD4Q9Y227 616 aa7.03□□□□□ -1.28
CLDN1-202ENST00000490800 RP1L1Q8IWN7 2480 aaPredicted RBP7.03□□□□□ -1.28
CLDN1-202ENST00000490800 IGLV3-12A0A075B6K2 115 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 NSG1A0A0A6YYJ2 146 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 WIPF3A6NGB9 483 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 EVPLLA8MZ36 301 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 FAM220BPB1ANY3 271 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 IDSB3KWA1 339 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 H0YIG0 161 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 ARPC2O15144 300 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 B4GALT2O60909 372 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 ERAL1O75616 437 aaKnown RBP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 PSMG1O95456 288 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 ATP6V1G2O95670 118 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 DDAH2O95865 285 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 HPP00738 406 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 HEXBP07686 556 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 C8orf89P0DMQ9 161 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 RNH1P13489 461 aaKnown RBP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 GPX2P18283 190 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 CSNK2A2P19784 350 aaPredicted RBP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 ATP6V1B2P21281 511 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 UQCRC2P22695 453 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 PPIBP23284 216 aaKnown RBP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 NTSP30990 170 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 TLX1P31314 330 aaPredicted RBP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 SOAT1P35610 550 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 FEN1P39748 380 aaKnown RBP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 AVPR1BP47901 424 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 NCBP2P52298 156 aaKnown RBP eCLIP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 MVDP53602 400 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 SKP1P63208 163 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 MAT1AQ00266 395 aaKnown RBP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 HSPB3Q12988 150 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 FAAH2Q6GMR7 532 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 LCN8Q6JVE9 175 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 NIPAL1Q6NVV3 410 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 CDPF1Q6NVV7 123 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 ISLR2Q6UXK2 745 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 NDUFAF7Q7L592 441 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 DHFR2Q86XF0 187 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 KBTBD2Q8IY47 623 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 MICU2Q8IYU8 434 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 TRIML2Q8N7C3 387 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 HIPK4Q8NE63 616 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 BHLHE22Q8NFJ8 381 aaPredicted RBP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 OR2T12Q8NG77 320 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 OR4K14Q8NGD5 310 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 ZFP28Q8NHY6 868 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 SUN3Q8TAQ9 357 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 PNPT1Q8TCS8 783 aaKnown RBP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 PSMF1Q92530 271 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 JADE3Q92613 823 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 FAM120BQ96EK7 910 aaKnown RBP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 LMF1Q96S06 567 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 TM9SF2Q99805 663 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 SLC35A5Q9BS91 424 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 MUC13Q9H3R2 512 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 CLK4Q9HAZ1 481 aaKnown RBP7.02□□□□□ -1.29
CLDN1-202ENST00000490800 AGPAT4Q9NRZ5 378 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 GIMAP4Q9NUV9 329 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 GPATCH2Q9NW75 528 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 PLA2G3Q9NZ20 509 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 ACTR3BQ9P1U1 418 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 HCN3Q9P1Z3 774 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 PTGFRNQ9P2B2 879 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 PSME2Q9UL46 239 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 SNX13Q9Y5W8 968 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 SPACA6W5XKT8 324 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 SHANK1Q9Y566 2161 aa7.02□□□□□ -1.29
CLDN1-202ENST00000490800 ESPL1Q14674 2120 aa7.01□□□□□ -1.29
CLDN1-202ENST00000490800 RNF103-CHMP3A0A140T963 221 aa7.01□□□□□ -1.29
CLDN1-202ENST00000490800 TCRBV3S1A0A5B6 114 aa7.01□□□□□ -1.29
CLDN1-202ENST00000490800 ELOVL7A1L3X0 281 aa7.01□□□□□ -1.29
CLDN1-202ENST00000490800 FGF17O60258 216 aa7.01□□□□□ -1.29
CLDN1-202ENST00000490800 JRKO75564 520 aa7.01□□□□□ -1.29
CLDN1-202ENST00000490800 KRT75O95678 551 aa7.01□□□□□ -1.29
CLDN1-202ENST00000490800 GPR75O95800 540 aa7.01□□□□□ -1.29
CLDN1-202ENST00000490800 LDLRP01130 860 aa7.01□□□□□ -1.29
CLDN1-202ENST00000490800 C8BP07358 591 aa7.01□□□□□ -1.29
CLDN1-202ENST00000490800 CELA2AP08217 269 aa7.01□□□□□ -1.29
CLDN1-202ENST00000490800 COX6A1P12074 109 aa7.01□□□□□ -1.29
CLDN1-202ENST00000490800 CPMP14384 443 aa7.01□□□□□ -1.29
CLDN1-202ENST00000490800 NCK1P16333 377 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms