RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 ADH7P40394 386 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 RFX3P48380 749 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 SNTA1Q13424 505 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 EFR3AQ14156 821 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 ZNF630Q2M218 657 aaPredicted RBP16.51■□□□□ 0.23
COL9A3-214ENST00000490398 EXOSC6Q5RKV6 272 aaKnown RBP16.51■□□□□ 0.23
COL9A3-214ENST00000490398 WLSQ5T9L3 541 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 CPTPQ5TA50 214 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 MFSD12Q6NUT3 480 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 APOOLQ6UXV4 268 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 SEM1Q6ZVN7 128 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 SZRD1Q7Z422 152 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 R3HCC1LQ7Z5L2 792 aaKnown RBP16.51■□□□□ 0.23
COL9A3-214ENST00000490398 ZAR1Q86SH2 424 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 ULK2Q8IYT8 1036 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 SLC16A11Q8NCK7 471 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 ZFP28Q8NHY6 868 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 TIMP4Q99727 224 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 TTYH2Q9BSA4 534 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 UCK2Q9BZX2 261 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 FBXO34Q9NWN3 711 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 ASIC5Q9NY37 505 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 EIF3LQ9Y262 564 aaKnown RBP16.51■□□□□ 0.23
COL9A3-214ENST00000490398 WIF1Q9Y5W5 379 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 NOTCH2Q04721 2471 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 EMC8O43402 210 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 SCO2O43819 266 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 ABCB7O75027 752 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 IL33O95760 270 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 C6orf47O95873 294 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 PRF1P14222 555 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 BMP7P18075 431 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 TCEA1P23193 301 aaKnown RBP16.5■□□□□ 0.23
COL9A3-214ENST00000490398 ELAVL4P26378 380 aaKnown RBP16.5■□□□□ 0.23
COL9A3-214ENST00000490398 KIR3DL1P43629 444 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 MRPS22P82650 360 aaKnown RBP16.5■□□□□ 0.23
COL9A3-214ENST00000490398 MLC1Q15049 377 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 DUSP5Q16690 384 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 CYP27C1Q4G0S4 372 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 PLCZ1Q86YW0 608 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 HOMEZQ8IX15 550 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 GPR151Q8TDV0 419 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 SLC9A6Q92581 669 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 RMND5BQ96G75 393 aaPredicted RBP16.5■□□□□ 0.23
COL9A3-214ENST00000490398 UGT2B28Q9BY64 529 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 Q9N2J8 555 aa16.5■□□□□ 0.23
COL9A3-214ENST00000490398 MARCOQ9UEW3 520 aaPredicted RBP16.5■□□□□ 0.23
COL9A3-214ENST00000490398 A0A0G2JNJ9 132 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 SDHDO14521 159 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 EVI2BP34910 448 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 CLDN8P56748 225 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 DECR1Q16698 335 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 C1orf185Q5T7R7 199 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 VASNQ6EMK4 673 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 TMEM211Q6ICI0 200 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 B3GNT6Q6ZMB0 384 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 LIX1LQ8IVB5 337 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 CLECL1Q8IZS7 167 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 CLEC4FQ8N1N0 589 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 OR5P2Q8WZ92 322 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 WDYHV1Q96HA8 205 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 MS4A4EQ96PG1 132 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 OR2B2Q9GZK3 357 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 ZCCHC3Q9NUD5 404 aaKnown RBP16.49■□□□□ 0.23
COL9A3-214ENST00000490398 Q9UFV3 132 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 LRBAP50851 2863 aa16.49■□□□□ 0.23
COL9A3-214ENST00000490398 MED12Q93074 2177 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 NKX2-6A6NCS4 301 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 FIGNL2A6NMB9 653 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 ANKRD28O15084 1053 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 CBR3O75828 277 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 TOXO94900 526 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 UTS2O95399 124 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 HMGN2P05204 90 aaKnown RBP16.48■□□□□ 0.23
COL9A3-214ENST00000490398 SNRPB2P08579 225 aaKnown RBP16.48■□□□□ 0.23
COL9A3-214ENST00000490398 ALDOCP09972 364 aaKnown RBP16.48■□□□□ 0.23
COL9A3-214ENST00000490398 KITP10721 976 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 PRPS1L1P21108 318 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 SLC18A1P54219 525 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 C21orf58P58505 322 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 PHC1P78364 1004 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 STX5Q13190 355 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 ZNHIT3Q15649 155 aaPredicted RBP16.48■□□□□ 0.23
COL9A3-214ENST00000490398 PGS1Q32NB8 556 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 GRAMD1BQ3KR37 738 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 TTMPQ5BVD1 217 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 OR4F3Q6IEY1 312 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 FIGNL1Q6PIW4 674 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 MARCH3Q86UD3 253 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 CDRT4Q8N9R6 151 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 OR5AK3PQ8NH89 298 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 CEP70Q8NHQ1 597 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 PSMA8Q8TAA3 256 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 RND1Q92730 232 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 DUSP26Q9BV47 211 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 BHLHE41Q9C0J9 482 aaPredicted RBP16.48■□□□□ 0.23
COL9A3-214ENST00000490398 PRDM14Q9GZV8 571 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 DSN1Q9H410 356 aa16.48■□□□□ 0.23
COL9A3-214ENST00000490398 WDR55Q9H6Y2 383 aaPredicted RBP16.48■□□□□ 0.23
COL9A3-214ENST00000490398 MEAF6Q9HAF1 191 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms