RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 DEKP35659 375 aaKnown RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 FEN1P39748 380 aaKnown RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 SUCLG1P53597 346 aaKnown RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 MAPK12P53778 367 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 TPD52P55327 224 aaPredicted RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 MRPS22P82650 360 aaKnown RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 MRPS35P82673 323 aaKnown RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 GALNT1Q10472 559 aaPredicted RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 ACAP2Q15057 778 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 PON3Q15166 354 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 LTB4RQ15722 352 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 PFKFB4Q16877 469 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 GLYR1Q49A26 553 aaPredicted RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 ZNF628Q5EBL2 1059 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 CCNYL2Q5T2Q4 361 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 ANKRD34AQ69YU3 496 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 OR5M10Q6IEU7 315 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 NPSR1Q6W5P4 371 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 DNAJC14Q6Y2X3 702 aaPredicted RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 RAPH1Q70E73 1250 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 COMMD6Q7Z4G1 85 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 MAPK1IP1LQ8NDC0 245 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 OR2M3Q8NG83 312 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 OR4K17Q8NGC6 315 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 NXNL1Q96CM4 212 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 TRMT61AQ96FX7 289 aaKnown RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 PLPPR2Q96GM1 343 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 VSTM2LQ96N03 204 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 NTMT1Q9BV86 223 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 KLHL4Q9C0H6 718 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 ZBTB26Q9HCK0 441 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 FANCFQ9NPI8 374 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 PSME2Q9UL46 239 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 ZNF337Q9Y3M9 751 aa7.35□□□□□ -1.23
USP39-216ENST00000490193 YLPM1P49750 1951 aaKnown RBP7.35□□□□□ -1.23
USP39-216ENST00000490193 C17orf51A8MQB3 221 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 CCDC188H7C350 402 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 PHF1O43189 567 aaPredicted RBP7.34□□□□□ -1.23
USP39-216ENST00000490193 FADS1O60427 444 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 SS18L1O75177 396 aaPredicted RBP7.34□□□□□ -1.23
USP39-216ENST00000490193 AQP8O94778 261 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 SIX3O95343 332 aaPredicted RBP7.34□□□□□ -1.23
USP39-216ENST00000490193 FAM157CP0CG43 387 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 HK1P19367 917 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 IL12BP29460 328 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 EVI2BP34910 448 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 KRT20P35900 424 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 CLDN20P56880 219 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 CORO7P57737 925 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 RPS3AP61247 264 aaKnown RBP7.34□□□□□ -1.23
USP39-216ENST00000490193 TRA2BP62995 288 aaKnown RBP7.34□□□□□ -1.23
USP39-216ENST00000490193 TRAF3Q13114 568 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 NAB1Q13506 487 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 SLMAPQ14BN4 828 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 FAM83EQ2M2I3 478 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 TMEM44Q2T9K0 475 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 CHRFAM7AQ494W8 412 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 GGTA1PQ4G0N0 100 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 XP32Q5T750 250 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 RAET1LQ5VY80 246 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 BEND4Q6ZU67 534 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 C3orf62Q6ZUJ4 267 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 LARP4Q71RC2 724 aaKnown RBP eCLIP7.34□□□□□ -1.23
USP39-216ENST00000490193 GGNQ86UU5 652 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 KLHL7Q8IXQ5 586 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 OR52B6Q8NGF0 335 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 LILRB1Q8NHL6 650 aaPredicted RBP7.34□□□□□ -1.23
USP39-216ENST00000490193 KCTD4Q8WVF5 259 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 AKAP1Q92667 903 aaKnown RBP eCLIP7.34□□□□□ -1.23
USP39-216ENST00000490193 GFM2Q969S9 779 aaKnown RBP7.34□□□□□ -1.23
USP39-216ENST00000490193 TM4SF18Q96CE8 201 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 KLHL29Q96CT2 875 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 GMPPAQ96IJ6 420 aaPredicted RBP7.34□□□□□ -1.23
USP39-216ENST00000490193 TRIM31Q9BZY9 425 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 GRIP2Q9C0E4 1043 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 ACTR6Q9GZN1 396 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 STMN4Q9H169 189 aaPredicted RBP7.34□□□□□ -1.23
USP39-216ENST00000490193 SLCO5A1Q9H2Y9 848 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 DSN1Q9H410 356 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 NOL11Q9H8H0 719 aaKnown RBP7.34□□□□□ -1.23
USP39-216ENST00000490193 LRTM1Q9HBL6 345 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 PPP4R1LQ9P1A2 415 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 ABCG2Q9UNQ0 655 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 LAMP3Q9UQV4 416 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 GPR52Q9Y2T5 361 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 EMC9Q9Y3B6 208 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 AP4B1Q9Y6B7 739 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 ZNF780BQ9Y6R6 833 aa7.34□□□□□ -1.23
USP39-216ENST00000490193 IGLV3-32A0A0A0MS00 114 aa7.33□□□□□ -1.24
USP39-216ENST00000490193 A8MV72 311 aaPredicted RBP7.33□□□□□ -1.24
USP39-216ENST00000490193 H3BML4 177 aa7.33□□□□□ -1.24
USP39-216ENST00000490193 SEC14L5O43304 696 aa7.33□□□□□ -1.24
USP39-216ENST00000490193 PLOD3O60568 738 aa7.33□□□□□ -1.24
USP39-216ENST00000490193 C2P06681 752 aa7.33□□□□□ -1.24
USP39-216ENST00000490193 SOD3P08294 240 aa7.33□□□□□ -1.24
USP39-216ENST00000490193 CTAGE8P0CG41 777 aa7.33□□□□□ -1.24
USP39-216ENST00000490193 TCEA1P23193 301 aaKnown RBP7.33□□□□□ -1.24
USP39-216ENST00000490193 THBS2P35442 1172 aa7.33□□□□□ -1.24
USP39-216ENST00000490193 ACVR1BP36896 505 aa7.33□□□□□ -1.24
USP39-216ENST00000490193 IRF9Q00978 393 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms