RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CXCL14O95715 111 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 RAB36O95755 333 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 HLA-DPB1P04440 258 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PRR23D2P0DMB1 279 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 NR2F6P10588 404 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 IFNGR1P15260 489 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 NDUFB7P17568 137 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 RAB4AP20338 218 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CNR1P21554 472 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 GALP22466 123 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 AKAP5P24588 427 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 GNALP38405 381 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 HTR5AP47898 357 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PCP4P48539 62 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 AGTR2P50052 363 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 RABGGTBP53611 331 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 WNT4P56705 351 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 GMFBP60983 142 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 RAB2AP61019 212 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PITPNAQ00169 270 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 FABP5Q01469 135 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 RBBP4Q09028 425 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ILF3Q12906 894 aaKnown RBP eCLIP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SNTB2Q13425 540 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CAPSQ13938 189 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ABRAXAS2Q15018 415 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PCBP2Q15366 365 aaKnown RBP eCLIP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SF1Q15637 639 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MINDY4Q4G0A6 757 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 USP39Q53GS9 565 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM255AQ5JRV8 349 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 C9orf152Q5JTZ5 239 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MANEAQ5SRI9 462 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 GCNT6Q5T4J0 391 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM72AQ5TYM5 149 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM72DQ6L9T8 149 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 KIAA1161Q6NSJ0 714 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC30A6Q6NXT4 461 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF551Q7Z340 670 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TSEN54Q7Z6J9 526 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 OAFQ86UD1 273 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF227Q86WZ6 799 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM72BQ86X60 149 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CIR1Q86X95 450 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 KLBQ86Z14 1044 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SIAH3Q8IW03 269 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 GPR135Q8IZ08 494 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 OR6V1Q8N148 313 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 STK40Q8N2I9 435 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CPXM2Q8N436 756 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 NKAPQ8N5F7 415 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 KRTCAP2Q8N6L1 136 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 NPWQ8N729 165 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 DBF4BQ8NFT6 615 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 GNPDA2Q8TDQ7 276 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SH3RF2Q8TEC5 729 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 WNT8BQ93098 351 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TADA1Q96BN2 335 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PEX11GQ96HA9 241 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ZBED3Q96IU2 234 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ZC3H10Q96K80 434 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 HS6ST2Q96MM7 605 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MS4A4EQ96PG1 132 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PPP1R16BQ96T49 567 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 C2orf88Q9BSF0 95 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 AARSD1Q9BTE6 412 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MRIQ9BWK5 157 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TSSK6Q9BXA6 273 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 FSD1LQ9BXM9 530 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CHIAQ9BZP6 476 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TWSG1Q9GZX9 223 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 LMAN2LQ9H0V9 348 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 BARX1Q9HBU1 254 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 NMRK2Q9NPI5 230 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 NRBP2Q9NSY0 501 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 RASL12Q9NYN1 266 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 NLGN3Q9NZ94 848 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 GDE1Q9NZC3 331 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 NTMQ9P121 344 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 STOX2Q9P2F5 926 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MGAT4CQ9UBM8 478 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 AFF4Q9UHB7 1163 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC9A8Q9Y2E8 581 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PLEKHM1Q9Y4G2 1056 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 COL2A1P02458 1487 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SIP14410 1827 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 A0A1W2PRB8 838 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SMIM30A4D0T7 59 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 COLCA2A8K830 154 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SNRPGP15A8MWD9 76 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 NUDT19A8MXV4 375 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF879B4DU55 563 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 C5orf58C9J3I9 102 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 NEDD8-MDP1E9PL57 170 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM189-UBE2V1I3L0A0 370 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 I6L893 689 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 M0QYT0 321 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PSMD9O00233 223 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CLIC1O00299 241 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CLDN4O14493 209 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms