RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 VSTM2LQ96N03 204 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 BRF2Q9HAW0 419 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 XPR1Q9UBH6 696 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 SNX6Q9UNH7 406 aa15.28■□□□□ 0.04
TOP3B-217ENST00000489581 FBN1P35555 2871 aaKnown RBP15.28■□□□□ 0.04
TOP3B-217ENST00000489581 H3BML4 177 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 SMIM24O75264 130 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 IL3P08700 152 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 CD8BP10966 210 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 NID1P14543 1247 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 TBXA2RP21731 343 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 EVI2BP34910 448 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 CLDN20P56880 219 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 EEFSECP57772 596 aaKnown RBP15.27■□□□□ 0.04
TOP3B-217ENST00000489581 STX5Q13190 355 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 PON3Q15166 354 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 EXOC3L2Q2M3D2 409 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 RNF122Q9H9V4 155 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 NMRK1Q9NWW6 199 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 VPS29Q9UBQ0 182 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 TMCO1Q9UM00 188 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 PROCRQ9UNN8 238 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 OR10H1Q9Y4A9 318 aa15.27■□□□□ 0.04
TOP3B-217ENST00000489581 STAB1Q9NY15 2570 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.26■□□□□ 0.03
TOP3B-217ENST00000489581 KLF4O43474 513 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 OR4F21O95013 312 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 OTCP00480 354 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 PLAUP00749 431 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 THBDP07204 575 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 RPS17P08708 135 aaKnown RBP15.26■□□□□ 0.03
TOP3B-217ENST00000489581 NR1H2P55055 460 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 TCHHL1Q5QJ38 904 aaPredicted RBP15.26■□□□□ 0.03
TOP3B-217ENST00000489581 SH2D4BQ5SQS7 431 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 OR7G2Q8NG99 324 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 TMEM171Q8WVE6 324 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 IGFBPL1Q8WX77 278 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 ERP27Q96DN0 273 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 MTBPQ96DY7 904 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 RTN4RQ9BZR6 473 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 FLRT3Q9NZU0 649 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 ZNF225Q9UK10 706 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 ZNF175Q9Y473 711 aa15.26■□□□□ 0.03
TOP3B-217ENST00000489581 FREM1Q5H8C1 2179 aa15.25■□□□□ 0.03
TOP3B-217ENST00000489581 OR2M5A3KFT3 312 aa15.25■□□□□ 0.03
TOP3B-217ENST00000489581 AQP8O94778 261 aa15.25■□□□□ 0.03
TOP3B-217ENST00000489581 CHN1P15882 459 aa15.25■□□□□ 0.03
TOP3B-217ENST00000489581 MRPS22P82650 360 aaKnown RBP15.25■□□□□ 0.03
TOP3B-217ENST00000489581 FGFBP1Q14512 234 aa15.25■□□□□ 0.03
TOP3B-217ENST00000489581 GUSBP1Q15486 140 aa15.25■□□□□ 0.03
TOP3B-217ENST00000489581 BEX5Q5H9J7 111 aa15.25■□□□□ 0.03
TOP3B-217ENST00000489581 UBAP2Q5T6F2 1119 aaKnown RBP15.25■□□□□ 0.03
TOP3B-217ENST00000489581 ZNF704Q6ZNC4 412 aaPredicted RBP15.25■□□□□ 0.03
TOP3B-217ENST00000489581 UHMK1Q8TAS1 419 aaKnown RBP15.25■□□□□ 0.03
TOP3B-217ENST00000489581 ZNF483Q8TF39 744 aaPredicted RBP15.25■□□□□ 0.03
TOP3B-217ENST00000489581 CAVIN3Q969G5 261 aa15.25■□□□□ 0.03
TOP3B-217ENST00000489581 RAB17Q9H0T7 212 aa15.25■□□□□ 0.03
TOP3B-217ENST00000489581 TAS2R9Q9NYW1 312 aa15.25■□□□□ 0.03
TOP3B-217ENST00000489581 MCM8Q9UJA3 840 aa15.25■□□□□ 0.03
TOP3B-217ENST00000489581 CR1P17927 2039 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 CADP27708 2225 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 ALPK2Q86TB3 2170 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 UQCRHLA0A096LP55 91 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 MANBAO00462 879 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 FADS1O60427 444 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 PLOD3O60568 738 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 CRLF1O75462 422 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 ATP5J2P56134 94 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 RAE1P78406 368 aaKnown RBP15.24■□□□□ 0.03
TOP3B-217ENST00000489581 PSG6Q00889 435 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 ZNF155Q12901 538 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-217ENST00000489581 TNK1Q13470 666 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 SGCBQ16585 318 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 PPP4R4Q6NUP7 873 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 FAM214BQ7L5A3 538 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 SAMD14Q8IZD0 417 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-217ENST00000489581 FAM9CQ8IZT9 166 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 CDYL2Q8N8U2 506 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 DUSP19Q8WTR2 217 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 STMN4Q9H169 189 aaPredicted RBP15.24■□□□□ 0.03
TOP3B-217ENST00000489581 CXorf56Q9H5V9 222 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 PTGES2Q9H7Z7 377 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 SLC35C2Q9NQQ7 365 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 SDHAF3Q9NRP4 125 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 GIMAP4Q9NUV9 329 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 SENP1Q9P0U3 644 aa15.24■□□□□ 0.03
TOP3B-217ENST00000489581 ANK3Q12955 4377 aaKnown RBP15.24■□□□□ 0.03
TOP3B-217ENST00000489581 GNG14A0A1W2PPG7 69 aa15.23■□□□□ 0.03
TOP3B-217ENST00000489581 SHISA8B8ZZ34 492 aa15.23■□□□□ 0.03
TOP3B-217ENST00000489581 LINC01387J3KSC0 135 aa15.23■□□□□ 0.03
TOP3B-217ENST00000489581 GMFGO60234 142 aa15.23■□□□□ 0.03
TOP3B-217ENST00000489581 PCDH7O60245 1069 aa15.23■□□□□ 0.03
TOP3B-217ENST00000489581 PAX1P15863 534 aa15.23■□□□□ 0.03
TOP3B-217ENST00000489581 MAGEA12P43365 314 aa15.23■□□□□ 0.03
TOP3B-217ENST00000489581 RPS3AP61247 264 aaKnown RBP15.23■□□□□ 0.03
TOP3B-217ENST00000489581 PSPHP78330 225 aa15.23■□□□□ 0.03
TOP3B-217ENST00000489581 CAPRIN1Q14444 709 aaKnown RBP15.23■□□□□ 0.03
TOP3B-217ENST00000489581 GANABQ14697 944 aaKnown RBP15.23■□□□□ 0.03
TOP3B-217ENST00000489581 TSNAXIP1Q2TAA8 658 aa15.23■□□□□ 0.03
TOP3B-217ENST00000489581 SH2D5Q6ZV89 423 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms