RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 LDLRP01130 860 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 FABP3P05413 133 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 FESP07332 822 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 MMP11P24347 488 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 CD82P27701 267 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 PIGAP37287 484 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 PTDSS1P48651 473 aaKnown RBP19.33■□□□□ 0.68
SND1-214ENST00000489417 RPS18P62269 152 aaKnown RBP19.33■□□□□ 0.68
SND1-214ENST00000489417 TRIP10Q15642 601 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 GPR68Q15743 365 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 RSPO4Q2I0M5 234 aaPredicted RBP19.33■□□□□ 0.68
SND1-214ENST00000489417 CYP27C1Q4G0S4 372 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 APCDD1LQ8NCL9 501 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 NRG4Q8WWG1 115 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 GEMIN6Q8WXD5 167 aaKnown RBP19.33■□□□□ 0.68
SND1-214ENST00000489417 PROX1Q92786 737 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 PMM1Q92871 262 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 PINK1Q9BXM7 581 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 RSPO3Q9BXY4 272 aaPredicted RBP19.33■□□□□ 0.68
SND1-214ENST00000489417 ZNF700Q9H0M5 742 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 NXF5Q9H1B4 397 aaKnown RBP19.33■□□□□ 0.68
SND1-214ENST00000489417 SEMA6AQ9H2E6 1030 aa19.33■□□□□ 0.68
SND1-214ENST00000489417 ZNF223Q9UK11 482 aaPredicted RBP19.33■□□□□ 0.68
SND1-214ENST00000489417 SPEGQ15772 3267 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 CDRT15L2A8MXV6 281 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 hCG_2039718K7EN88 272 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 CLOCKO15516 846 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 DEAF1O75398 565 aaPredicted RBP19.32■□□□□ 0.68
SND1-214ENST00000489417 IGKV1D-16P01601 117 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 PABPC4LP0CB38 370 aaKnown RBP19.32■□□□□ 0.68
SND1-214ENST00000489417 TNFRSF1BP20333 461 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 ATP6V1C1P21283 382 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 RFX3P48380 749 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 VLDLRP98155 873 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 SDK2Q58EX2 2172 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 ZNF311Q5JNZ3 666 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 AP1ARQ63HQ0 302 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 HSDL2Q6YN16 418 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 PEX5LQ8IYB4 626 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 BCORP1Q8N888 145 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 OR52P1PQ8NH57 321 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 ZG16BQ96DA0 208 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 C7orf34Q96L11 122 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 G6PC3Q9BUM1 346 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 GPR87Q9BY21 358 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 FAM117AQ9C073 453 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 IFT52Q9Y366 437 aa19.32■□□□□ 0.68
SND1-214ENST00000489417 CCDC88CQ9P219 2028 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 IGHV1-45A0A0A0MS14 117 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 TERTO14746 1132 aaKnown RBP19.31■□□□□ 0.68
SND1-214ENST00000489417 PRKNO60260 465 aaPredicted RBP19.31■□□□□ 0.68
SND1-214ENST00000489417 COX6A1P12074 109 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 RPS4Y1P22090 263 aaKnown RBP19.31■□□□□ 0.68
SND1-214ENST00000489417 DLSTP36957 453 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 RNF4P78317 190 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 DECR1Q16698 335 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 DHRS4L2Q6PKH6 230 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 IGF2-ASQ6U949 168 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 PIWIL3Q7Z3Z3 882 aaKnown RBP19.31■□□□□ 0.68
SND1-214ENST00000489417 ZAR1Q86SH2 424 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 VRK2Q86Y07 508 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 AMER2Q8N7J2 671 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 ZNF441Q8N8Z8 693 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 C17orf47Q8NEP4 570 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 CENPNQ96H22 339 aaPredicted RBP19.31■□□□□ 0.68
SND1-214ENST00000489417 ZNF354BQ96LW1 612 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 DNAJB9Q9UBS3 223 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 ABCG2Q9UNQ0 655 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 SH3GLB1Q9Y371 365 aa19.31■□□□□ 0.68
SND1-214ENST00000489417 TRBV11-1A0A0K0K1C0 115 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 A0A1W2PQ72 361 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 AGAP5A6NIR3 686 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.3■□□□□ 0.68
SND1-214ENST00000489417 SOCS6O14544 535 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 CST1P01037 141 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 DBIP07108 87 aaKnown RBP19.3■□□□□ 0.68
SND1-214ENST00000489417 THBS1P07996 1170 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 PRKAR1BP31321 381 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 OR1E2P47887 323 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 NR0B1P51843 470 aaKnown RBP19.3■□□□□ 0.68
SND1-214ENST00000489417 KCNC4Q03721 635 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 SSPNQ14714 243 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.3■□□□□ 0.68
SND1-214ENST00000489417 FLYWCH1Q4VC44 716 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 LPCAT4Q643R3 524 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 KIRREL2Q6UWL6 708 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 PPP1R32Q7Z5V6 425 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 OR8K3Q8NH51 312 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 APOBEC4Q8WW27 367 aaKnown RBP19.3■□□□□ 0.68
SND1-214ENST00000489417 NRSN2Q9GZP1 204 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 ASCL3Q9NQ33 180 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 THSD1Q9NS62 852 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 ZNF232Q9UNY5 417 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 ZNF443Q9Y2A4 671 aaPredicted RBP19.3■□□□□ 0.68
SND1-214ENST00000489417 PCDHGA10Q9Y5H3 936 aa19.3■□□□□ 0.68
SND1-214ENST00000489417 PTPRBP23467 1997 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 NPIPA5A0A0B4J1W7 369 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 LOC101059948A0A1B0GTJ6 334 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 PRAMEF25A6NGN4 478 aa19.29■□□□□ 0.68
SND1-214ENST00000489417 NPIPA7E9PJI5 369 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms