RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 HNF1AP20823 631 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 TAGLN2P37802 199 aaKnown RBP3.51□□□□□ -1.85
XRN1-213ENST00000489241 BRCC3P46736 316 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 POU3F4P49335 361 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 SLC7A2P52569 658 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 OSTNP61366 133 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 IL9RQ01113 521 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 LY6DQ14210 128 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 CHI3L2Q15782 390 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 UBE2V2Q15819 145 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 CCL14Q16627 93 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 MS4A18Q3C1V0 323 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 LINC00242Q5T6M2 205 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 SEL1L2Q5TEA6 688 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 TTC23Q5W5X9 447 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 APOOLQ6UXV4 268 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 LANCL3Q6ZV70 420 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 STOX1Q6ZVD7 989 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 LRRC70Q7Z2Q7 622 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 TSEN54Q7Z6J9 526 aaKnown RBP3.51□□□□□ -1.85
XRN1-213ENST00000489241 RPAINQ86UA6 219 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 RPL3LQ92901 407 aaKnown RBP3.51□□□□□ -1.85
XRN1-213ENST00000489241 MOCOSQ96EN8 888 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 PRICKLE1Q96MT3 831 aaPredicted RBP3.51□□□□□ -1.85
XRN1-213ENST00000489241 AGAP3Q96P47 875 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 SECISBP2Q96T21 854 aaKnown RBP3.51□□□□□ -1.85
XRN1-213ENST00000489241 HSD17B14Q9BPX1 270 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 TTYH2Q9BSA4 534 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 FGFBP2Q9BYJ0 223 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 TRIM6Q9C030 488 aaPredicted RBP3.51□□□□□ -1.85
XRN1-213ENST00000489241 COMMD4Q9H0A8 199 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 UPF3AQ9H1J1 476 aaKnown RBP3.51□□□□□ -1.85
XRN1-213ENST00000489241 LRRC40Q9H9A6 602 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 ELOVL3Q9HB03 270 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 ESM1Q9NQ30 184 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 RNF14Q9UBS8 474 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 ASIC3Q9UHC3 531 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 CIDEBQ9UHD4 219 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 RARRES3Q9UL19 164 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 SPATA2Q9UM82 520 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 SMC3Q9UQE7 1217 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 PRSS21Q9Y6M0 314 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 IGKV3D-15A0A087WSY6 115 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 TEX48A0A1B0GUV7 120 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 MFSD2BA6NFX1 497 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 UBXN8O00124 270 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 NUDT21O43809 227 aaKnown RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 IDH3BO43837 385 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 SNNO75324 88 aaPredicted RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 B3GAT3O94766 335 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 SORBS2O94875 1100 aaKnown RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 IGHG3P01860 377 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 HCKP08631 526 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 DPEP1P16444 411 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 STK19P49842 368 aaPredicted RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 EIF2B1Q14232 305 aaKnown RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 SIX1Q15475 284 aaPredicted RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 MAPK6Q16659 721 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 TMEM52BQ4KMG9 183 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 C14orf177Q52M58 125 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 CELF3Q5SZQ8 465 aaKnown RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 FAM219BQ5XKK7 198 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 CYS1Q717R9 158 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 PRSS48Q7RTY5 328 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 LRRTM1Q86UE6 522 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 ANKFN1Q8N957 763 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 SUMF1Q8NBK3 374 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 PRSS33Q8NF86 280 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 CTNNBL1Q8WYA6 563 aaPredicted RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 GTF3AQ92664 365 aaKnown RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 C18orf25Q96B23 403 aaPredicted RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 DNAJA3Q96EY1 480 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 C11orf24Q96F05 449 aaPredicted RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 CNDP1Q96KN2 507 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 CCT7Q99832 543 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 SYT11Q9BT88 431 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 CCDC28BQ9BUN5 200 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 RNF41Q9H4P4 317 aaPredicted RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 ELL3Q9HB65 397 aaPredicted RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 RAI14Q9P0K7 980 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 MLXQ9UH92 298 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 MGAT4AQ9UM21 535 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 EIF3LQ9Y262 564 aaKnown RBP3.5□□□□□ -1.85
XRN1-213ENST00000489241 METP08581 1390 aa3.5□□□□□ -1.85
XRN1-213ENST00000489241 NOTCH3Q9UM47 2321 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 IGLV4-3A0A075B6K6 122 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 FAM74A7A6NL05 159 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.49□□□□□ -1.85
XRN1-213ENST00000489241 H7C423 109 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 PDHXO00330 501 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 TYROBPO43914 113 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 EFNA2O43921 213 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 IL1BP01584 269 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 IGF1P05019 195 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 WNT2P09544 360 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 SLC1A4P43007 532 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 MAGEA5P43359 124 aa3.49□□□□□ -1.85
XRN1-213ENST00000489241 ATP4BP51164 291 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms