RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 ZFP28Q8NHY6 868 aa12.95□□□□□ -0.34
COL9A2-208ENST00000488463 FAM110BQ8TC76 370 aa12.95□□□□□ -0.34
COL9A2-208ENST00000488463 MGARPQ8TDB4 240 aa12.95□□□□□ -0.34
COL9A2-208ENST00000488463 TMCO6Q96DC7 493 aa12.95□□□□□ -0.34
COL9A2-208ENST00000488463 FAM120BQ96EK7 910 aaKnown RBP12.95□□□□□ -0.34
COL9A2-208ENST00000488463 NUF2Q9BZD4 464 aa12.95□□□□□ -0.34
COL9A2-208ENST00000488463 KLRF1Q9NZS2 232 aa12.95□□□□□ -0.34
COL9A2-208ENST00000488463 B4GALT7Q9UBV7 327 aa12.95□□□□□ -0.34
COL9A2-208ENST00000488463 CBLCQ9ULV8 474 aa12.95□□□□□ -0.34
COL9A2-208ENST00000488463 WIF1Q9Y5W5 379 aa12.95□□□□□ -0.34
COL9A2-208ENST00000488463 HRNRQ86YZ3 2850 aaPredicted RBP12.94□□□□□ -0.34
COL9A2-208ENST00000488463 TTC36A6NLP5 189 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 EMC8O43402 210 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 SCN2BO60939 215 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 ALDOCP09972 364 aaKnown RBP12.94□□□□□ -0.34
COL9A2-208ENST00000488463 ACVR2AP27037 513 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 GABRA3P34903 492 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 EVI2BP34910 448 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 GPC1P35052 558 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 RPL3P39023 403 aaKnown RBP12.94□□□□□ -0.34
COL9A2-208ENST00000488463 MASP1P48740 699 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 PHC1P78364 1004 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 MAD2L1Q13257 205 aaPredicted RBP12.94□□□□□ -0.34
COL9A2-208ENST00000488463 ZNF630Q2M218 657 aaPredicted RBP12.94□□□□□ -0.34
COL9A2-208ENST00000488463 EIPR1Q53HC9 387 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 HSP90B2PQ58FF3 399 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 TTMPQ5BVD1 217 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 NHSL2Q5HYW2 709 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 VASNQ6EMK4 673 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 OGFOD2Q6N063 350 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 MFSD12Q6NUT3 480 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 KIRREL3Q8IZU9 778 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 SLC16A11Q8NCK7 471 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 FAM83FQ8NEG4 500 aaPredicted RBP12.94□□□□□ -0.34
COL9A2-208ENST00000488463 NUP43Q8NFH3 380 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 CEP70Q8NHQ1 597 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 RAB3IL1Q8TBN0 382 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 OR5P2Q8WZ92 322 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 PIK3R3Q92569 461 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 SARAFQ96BY9 339 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 C16orf58Q96GQ5 468 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 SH3GL2Q99962 352 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 BHLHE41Q9C0J9 482 aaPredicted RBP12.94□□□□□ -0.34
COL9A2-208ENST00000488463 OR2B2Q9GZK3 357 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 LDAHQ9H6V9 325 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 CXorf36Q9H7Y0 433 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 EQTNQ9NQ60 294 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 SERHLQ9NQF3 203 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 THAP1Q9NVV9 213 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 NOP53Q9NZM5 478 aaKnown RBP12.94□□□□□ -0.34
COL9A2-208ENST00000488463 MAPRE3Q9UPY8 281 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 EIF3LQ9Y262 564 aaKnown RBP12.94□□□□□ -0.34
COL9A2-208ENST00000488463 OR10H1Q9Y4A9 318 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 PCDHGB3Q9Y5G1 929 aa12.94□□□□□ -0.34
COL9A2-208ENST00000488463 HCFC1P51610 2035 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 A0A1W2PRB8 838 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 ZNF195O14628 629 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 KLF11O14901 512 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 GLI4P10075 376 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 IL12BP29460 328 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 SMSP52788 366 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 NUP107P57740 925 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 MRPS22P82650 360 aaKnown RBP12.93□□□□□ -0.34
COL9A2-208ENST00000488463 DUSP5Q16690 384 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 DECR1Q16698 335 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 DCST1Q5T197 706 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 APOOLQ6UXV4 268 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 SEM1Q6ZVN7 128 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 MAVSQ7Z434 540 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 ZAR1Q86SH2 424 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 PLCZ1Q86YW0 608 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 WDR75Q8IWA0 830 aaKnown RBP12.93□□□□□ -0.34
COL9A2-208ENST00000488463 FADS6Q8N9I5 356 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 CDRT4Q8N9R6 151 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 ACBD4Q8NC06 268 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 OR8J2Q8NGG1 315 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 DOCK7Q96N67 2140 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 MS4A4EQ96PG1 132 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 TIMP4Q99727 224 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 TTYH2Q9BSA4 534 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 PRDM14Q9GZV8 571 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 MANSC1Q9H8J5 431 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 Q9N2J8 555 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 GPATCH2Q9NW75 528 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 FBXO34Q9NWN3 711 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 FBXL2Q9UKC9 423 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 ACAD8Q9UKU7 415 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 ABCG2Q9UNQ0 655 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 SLC6A5Q9Y345 797 aa12.93□□□□□ -0.34
COL9A2-208ENST00000488463 KDM4EB2RXH2 506 aaPredicted RBP12.92□□□□□ -0.34
COL9A2-208ENST00000488463 C19orf84I3L1E1 186 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 HDAC3O15379 428 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 WDR1O75083 606 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 CBR3O75828 277 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 TRAPPC6AO75865 159 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 CLDN14O95500 239 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 C6orf47O95873 294 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 HMGN2P05204 90 aaKnown RBP12.92□□□□□ -0.34
COL9A2-208ENST00000488463 BMP7P18075 431 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 LBPP18428 481 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms