RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 DGKQP52824 942 aa17.52■□□□□ 0.39
CD55-209ENST00000488171 CLDN18P56856 261 aa17.52■□□□□ 0.39
CD55-209ENST00000488171 B3GALT5-AS1P59052 145 aa17.52■□□□□ 0.39
CD55-209ENST00000488171 ANKRD26P1Q6NSI1 321 aa17.52■□□□□ 0.39
CD55-209ENST00000488171 AAGABQ6PD74 315 aa17.52■□□□□ 0.39
CD55-209ENST00000488171 ZNF551Q7Z340 670 aaPredicted RBP17.52■□□□□ 0.39
CD55-209ENST00000488171 FADS6Q8N9I5 356 aa17.52■□□□□ 0.39
CD55-209ENST00000488171 GFM2Q969S9 779 aaKnown RBP17.52■□□□□ 0.39
CD55-209ENST00000488171 SFXN2Q96NB2 322 aa17.52■□□□□ 0.39
CD55-209ENST00000488171 LMF2Q9BU23 707 aaKnown RBP17.52■□□□□ 0.39
CD55-209ENST00000488171 RTN4RQ9BZR6 473 aa17.52■□□□□ 0.39
CD55-209ENST00000488171 RASSF1Q9NS23 344 aa17.52■□□□□ 0.39
CD55-209ENST00000488171 MKS1Q9NXB0 559 aa17.52■□□□□ 0.39
CD55-209ENST00000488171 MID2Q9UJV3 735 aa17.52■□□□□ 0.39
CD55-209ENST00000488171 FIS1Q9Y3D6 152 aa17.52■□□□□ 0.39
CD55-209ENST00000488171 EEF1E1-BLOC1S5C9J1V9 151 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 EEF1E1O43324 174 aaKnown RBP17.51■□□□□ 0.39
CD55-209ENST00000488171 RGS14O43566 566 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 TRIM13O60858 407 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 RCBTB2O95199 551 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 IFI6P09912 130 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 TCEA1P23193 301 aaKnown RBP17.51■□□□□ 0.39
CD55-209ENST00000488171 DSCR4P56555 118 aaPredicted RBP17.51■□□□□ 0.39
CD55-209ENST00000488171 ZNF385BQ569K4 471 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 KANK2Q63ZY3 851 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 OR2M3Q8NG83 312 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 OR4K17Q8NGC6 315 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 FAM222BQ8WU58 562 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 WNT2BQ93097 391 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 DTNBP1Q96EV8 351 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 ZNF764Q96H86 408 aaPredicted RBP17.51■□□□□ 0.39
CD55-209ENST00000488171 APOPT1Q96IL0 206 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 TM9SF2Q99805 663 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 CCT7Q99832 543 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 TRMOQ9BU70 441 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 POLDIP3Q9BY77 421 aaKnown RBP17.51■□□□□ 0.39
CD55-209ENST00000488171 DSN1Q9H410 356 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 Q9N2J8 555 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 PPP4R1LQ9P1A2 415 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 ABCG2Q9UNQ0 655 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 RPH3AQ9Y2J0 694 aaPredicted RBP17.51■□□□□ 0.39
CD55-209ENST00000488171 DNAJC15Q9Y5T4 150 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 HIVEP1P15822 2718 aa17.51■□□□□ 0.39
CD55-209ENST00000488171 TLDC2A0PJX2 215 aa17.5■□□□□ 0.39
CD55-209ENST00000488171 A6NNC1 897 aa17.5■□□□□ 0.39
CD55-209ENST00000488171 IL33O95760 270 aa17.5■□□□□ 0.39
CD55-209ENST00000488171 LINC00032P0C843 101 aa17.5■□□□□ 0.39
CD55-209ENST00000488171 SDC1P18827 310 aa17.5■□□□□ 0.39
CD55-209ENST00000488171 HSPB3Q12988 150 aa17.5■□□□□ 0.39
CD55-209ENST00000488171 DECR1Q16698 335 aa17.5■□□□□ 0.39
CD55-209ENST00000488171 RFTN2Q52LD8 501 aaPredicted RBP17.5■□□□□ 0.39
CD55-209ENST00000488171 TRABD2AQ86V40 505 aa17.5■□□□□ 0.39
CD55-209ENST00000488171 BANPQ8N9N5 519 aa17.5■□□□□ 0.39
CD55-209ENST00000488171 CIDECQ96AQ7 238 aaPredicted RBP17.5■□□□□ 0.39
CD55-209ENST00000488171 ZFP3Q96NJ6 502 aa17.5■□□□□ 0.39
CD55-209ENST00000488171 CLEC4MQ9H2X3 399 aaPredicted RBP17.5■□□□□ 0.39
CD55-209ENST00000488171 LSM1O15116 133 aaKnown RBP17.49■□□□□ 0.39
CD55-209ENST00000488171 PDPK1O15530 556 aa17.49■□□□□ 0.39
CD55-209ENST00000488171 HCRTR2O43614 444 aa17.49■□□□□ 0.39
CD55-209ENST00000488171 CHRNGP07510 517 aa17.49■□□□□ 0.39
CD55-209ENST00000488171 NEFHP12036 1026 aa17.49■□□□□ 0.39
CD55-209ENST00000488171 ALDH3A1P30838 453 aa17.49■□□□□ 0.39
CD55-209ENST00000488171 ART1P52961 327 aa17.49■□□□□ 0.39
CD55-209ENST00000488171 IST1P53990 364 aa17.49■□□□□ 0.39
CD55-209ENST00000488171 ZNHIT3Q15649 155 aaPredicted RBP17.49■□□□□ 0.39
CD55-209ENST00000488171 BCL2A1Q16548 175 aa17.49■□□□□ 0.39
CD55-209ENST00000488171 HOXB13Q92826 284 aaPredicted RBP17.49■□□□□ 0.39
CD55-209ENST00000488171 INTS12Q96CB8 462 aaKnown RBP17.49■□□□□ 0.39
CD55-209ENST00000488171 TSSK3Q96PN8 268 aa17.49■□□□□ 0.39
CD55-209ENST00000488171 SFXN3Q9BWM7 321 aa17.49■□□□□ 0.39
CD55-209ENST00000488171 LIME1Q9H400 295 aa17.49■□□□□ 0.39
CD55-209ENST00000488171 REEP4Q9H6H4 257 aa17.49■□□□□ 0.39
CD55-209ENST00000488171 FAM120CQ9NX05 1096 aaKnown RBP17.49■□□□□ 0.39
CD55-209ENST00000488171 MED11Q9P086 117 aa17.49■□□□□ 0.39
CD55-209ENST00000488171 GXYLT2A0PJZ3 443 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 TUBAL3A6NHL2 446 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 TMEM233B4DJY2 109 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 AKAP10O43572 662 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 TBX19O60806 448 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 IGKV1D-16P01601 117 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 FGF4P08620 206 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 NUDT17P0C025 328 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 GABRA3P34903 492 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 MAP3K8P41279 467 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 FRKP42685 505 aaPredicted RBP17.48■□□□□ 0.39
CD55-209ENST00000488171 RPL38P63173 70 aaKnown RBP17.48■□□□□ 0.39
CD55-209ENST00000488171 SORDQ00796 357 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 STX5Q13190 355 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 PDE7AQ13946 482 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 DAZAP2Q15038 168 aaPredicted RBP17.48■□□□□ 0.39
CD55-209ENST00000488171 UGT3A2Q3SY77 523 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 MARCH3Q86UD3 253 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 KIF18BQ86Y91 864 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 GCNT2Q8N0V5 402 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 RIBC1Q8N443 379 aaPredicted RBP17.48■□□□□ 0.39
CD55-209ENST00000488171 CLHC1Q8NHS4 586 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 PPCDCQ96CD2 204 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 FAM111AQ96PZ2 611 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 MECRQ9BV79 373 aa17.48■□□□□ 0.39
CD55-209ENST00000488171 IQCGQ9H095 443 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms