RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 LSSP48449 732 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 ALDH9A1P49189 494 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 IKZF1Q13422 519 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 COL9A2Q14055 689 aaPredicted RBP12.86□□□□□ -0.35
COPS7B-221ENST00000488111 KIR2DS3Q14952 304 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 LARS2Q15031 903 aaKnown RBP12.86□□□□□ -0.35
COPS7B-221ENST00000488111 TATDN3Q17R31 274 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 TOR1AIP2Q8NFQ8 470 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 ENKURQ8TC29 256 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 SAP25Q8TEE9 199 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 KIAA1143Q96AT1 154 aaPredicted RBP12.86□□□□□ -0.35
COPS7B-221ENST00000488111 SLC22A18Q96BI1 424 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 ZC3HAV1LQ96H79 300 aaKnown RBP12.86□□□□□ -0.35
COPS7B-221ENST00000488111 FCRL4Q96PJ5 515 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 FEVQ99581 238 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 MACROD1Q9BQ69 325 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 C17orf62Q9BQA9 187 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 OR51B5Q9H339 312 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 RABL2BQ9UNT1 228 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 ZNF451Q9Y4E5 1061 aa12.86□□□□□ -0.35
COPS7B-221ENST00000488111 RHPN2P1A8MT19 583 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 ZNF670-ZNF695F2Z2N8 137 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 C1QCP02747 245 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 PDGFAP04085 211 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 SERPIND1P05546 499 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 MPLP40238 635 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 MAPK12P53778 367 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 KCNJ10P78508 379 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 ABATP80404 500 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 REEP5Q00765 189 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 RUNX1T1Q06455 604 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.85□□□□□ -0.35
COPS7B-221ENST00000488111 PXDC1Q5TGL8 231 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 NKAIN2Q5VXU1 208 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 SLC23A3Q6PIS1 610 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 MSANTD1Q6ZTZ1 278 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 GPR155Q7Z3F1 870 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 OOSP2Q86WS3 158 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 VANGL1Q8TAA9 524 aaPredicted RBP12.85□□□□□ -0.35
COPS7B-221ENST00000488111 TESCQ96BS2 214 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 SYNPO2LQ9H987 977 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 EXOSC4Q9NPD3 245 aaKnown RBP12.85□□□□□ -0.35
COPS7B-221ENST00000488111 C12orf4Q9NQ89 552 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 SNTG1Q9NSN8 517 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 TMEM184CQ9NVA4 438 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 EVA1BQ9NVM1 165 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 SLC23A1Q9UHI7 598 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 PPT2Q9UMR5 302 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 POFUT2Q9Y2G5 429 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 HSPB11Q9Y547 144 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 TP53BP1Q12888 1972 aaPredicted RBP12.85□□□□□ -0.35
COPS7B-221ENST00000488111 C2orf74A8MZ97 194 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 PRR33A8MZF0 331 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 RFXANKO14593 260 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 OR7A10O76100 309 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 CRYBB2P43320 205 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 POU6F2P78424 691 aaPredicted RBP12.85□□□□□ -0.35
COPS7B-221ENST00000488111 RHAGQ02094 409 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 ZC3H14Q6PJT7 736 aaKnown RBP12.85□□□□□ -0.35
COPS7B-221ENST00000488111 KANSL1Q7Z3B3 1105 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 SLC5A8Q8N695 610 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 DNAJA4Q8WW22 397 aaPredicted RBP12.85□□□□□ -0.35
COPS7B-221ENST00000488111 APOLD1Q96LR9 279 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 ABCB9Q9NP78 766 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 DMRT3Q9NQL9 472 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 ING3Q9NXR8 418 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 VPS29Q9UBQ0 182 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 SEC14L4Q9UDX3 406 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 POLHQ9Y253 713 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 DLGAP4Q9Y2H0 992 aa12.85□□□□□ -0.35
COPS7B-221ENST00000488111 LSM2Q9Y333 95 aaKnown RBP12.85□□□□□ -0.35
COPS7B-221ENST00000488111 ADAMTS9Q9P2N4 1935 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 WDR87Q6ZQQ6 2873 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 SH3D21A4FU49 640 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 ANKDD1BA6NHY2 528 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 BET1O15155 118 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 PROM1O43490 865 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 LGI1O95970 557 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 DDX5P17844 614 aaKnown RBP12.84□□□□□ -0.35
COPS7B-221ENST00000488111 GPX2P18283 190 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 GPC1P35052 558 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 BCL6P41182 706 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 SLC9A3P48764 834 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 OR1D5P58170 312 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 PDZK1Q5T2W1 519 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 ZBTB37Q5TC79 503 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 PLAG1Q6DJT9 500 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 ARMC6Q6NXE6 501 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 PLET1Q6UQ28 207 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 KCTD20Q7Z5Y7 419 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 TSEN54Q7Z6J9 526 aaKnown RBP12.84□□□□□ -0.35
COPS7B-221ENST00000488111 OR10G2Q8NGC3 310 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 WDR36Q8NI36 951 aaKnown RBP12.84□□□□□ -0.35
COPS7B-221ENST00000488111 UBE2E3Q969T4 207 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 CCDC120Q96HB5 630 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 PADI2Q9Y2J8 665 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 FAM221BA6H8Z2 402 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 CLIC1O00299 241 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 TNFRSF11BO00300 401 aa12.84□□□□□ -0.35
COPS7B-221ENST00000488111 SCO1O75880 301 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms