RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 PLCXD2Q0VAA5 305 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 CDC20Q12834 499 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 FLOT2Q14254 428 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 LARS2Q15031 903 aaKnown RBP10.21□□□□□ -0.77
HDLBP-242ENST00000488013 MEP1AQ16819 746 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 CRB2Q5IJ48 1285 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 FAM69BQ5VUD6 431 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 GLYATQ6IB77 296 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 LCN8Q6JVE9 175 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 H3F3CQ6NXT2 135 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 CCDC81Q6ZN84 652 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 PTOV1Q86YD1 416 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 PEX5LQ8IYB4 626 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 RNF148Q8N7C7 305 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 ZNF321PQ8N8H1 164 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 DOK4Q8TEW6 326 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 FIG4Q92562 907 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 TTC9Q92623 222 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 DIO2Q92813 273 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 CDS1Q92903 461 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 RAB8BQ92930 207 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 FAM162AQ96A26 154 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 CCDC124Q96CT7 223 aaKnown RBP10.21□□□□□ -0.77
HDLBP-242ENST00000488013 TMCO6Q96DC7 493 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 RMND5BQ96G75 393 aaPredicted RBP10.21□□□□□ -0.77
HDLBP-242ENST00000488013 TMEM19Q96HH6 336 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 SGCZQ96LD1 299 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 SECISBP2Q96T21 854 aaKnown RBP10.21□□□□□ -0.77
HDLBP-242ENST00000488013 SDF2Q99470 211 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 SAP130Q9H0E3 1048 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 NXF5Q9H1B4 397 aaKnown RBP10.21□□□□□ -0.77
HDLBP-242ENST00000488013 SERHL2Q9H4I8 314 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 UBQLN4Q9NRR5 601 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 ADPRHL2Q9NX46 363 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 BAG5Q9UL15 447 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 SAMD4AQ9UPU9 718 aaKnown RBP10.21□□□□□ -0.77
HDLBP-242ENST00000488013 POMPQ9Y244 141 aa10.21□□□□□ -0.77
HDLBP-242ENST00000488013 MRPS18BQ9Y676 258 aaKnown RBP10.21□□□□□ -0.77
HDLBP-242ENST00000488013 H3BNH8 94 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 TP53I11O14683 189 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 NKX2-8O15522 239 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 EFSO43281 561 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 TLX3O43711 291 aaPredicted RBP10.2□□□□□ -0.78
HDLBP-242ENST00000488013 H6PDO95479 791 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 ALPPP05187 535 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 DBIP07108 87 aaKnown RBP10.2□□□□□ -0.78
HDLBP-242ENST00000488013 THBS1P07996 1170 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 UMPSP11172 480 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 HPGDP15428 266 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 ITGA3P26006 1051 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 ABCD3P28288 659 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 CASRP41180 1078 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 SSR4P51571 173 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 PCBP3P57721 371 aaKnown RBP10.2□□□□□ -0.78
HDLBP-242ENST00000488013 CORO7P57737 925 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 MLF1P58340 268 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 KCNJ2P63252 427 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 ABHD17BQ5VST6 288 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 AGAP7PQ5VUJ5 663 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 NPSR1Q6W5P4 371 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 NUP54Q7Z3B4 507 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 APLFQ8IW19 511 aaPredicted RBP10.2□□□□□ -0.78
HDLBP-242ENST00000488013 CMIPQ8IY22 773 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 ZNF619Q8N2I2 560 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 BCORP1Q8N888 145 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 SIMC1Q8NDZ2 872 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 NFKBIDQ8NI38 313 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 FBXO30Q8TB52 745 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 SLC26A7Q8TE54 656 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 MAL2Q969L2 176 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 NAF1Q96HR8 494 aaKnown RBP10.2□□□□□ -0.78
HDLBP-242ENST00000488013 CLPTM1LQ96KA5 538 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 COL21A1Q96P44 957 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 AGAP4Q96P64 663 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 TRIM8Q9BZR9 551 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 ING2Q9H160 280 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 PIF1Q9H611 641 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 OLAHQ9NV23 265 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 SCN3AQ9NY46 2000 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 ZNF223Q9UK11 482 aaPredicted RBP10.2□□□□□ -0.78
HDLBP-242ENST00000488013 SLC13A4Q9UKG4 626 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 NPFFR2Q9Y5X5 522 aa10.2□□□□□ -0.78
HDLBP-242ENST00000488013 SPTBN2O15020 2390 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 DSPPQ9NZW4 1301 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 AGAP5A6NIR3 686 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 A8MUI8 341 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 H0YHG0 523 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 M0QX08 132 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 ACOT8O14734 319 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 ARPC2O15144 300 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 SUV39H1O43463 412 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 KIAA0513O60268 411 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 REM1O75628 298 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 PPM1BO75688 479 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 GPIP06744 558 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 C8BP07358 591 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 FBXO45P0C2W1 286 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 PRKAR1BP31321 381 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 ATP12AP54707 1039 aa10.19□□□□□ -0.78
HDLBP-242ENST00000488013 CASP9P55211 416 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms