RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, human

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPSA-208	ENST00000487876	RTN4R	Q9BZR6	473 aa		11.76	□□□□□ -0.53
RPSA-208	ENST00000487876	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.76	□□□□□ -0.53
RPSA-208	ENST00000487876	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.76	□□□□□ -0.53
RPSA-208	ENST00000487876	PNPO	Q9NVS9	261 aa		11.76	□□□□□ -0.53
RPSA-208	ENST00000487876	FBXL2	Q9UKC9	423 aa		11.76	□□□□□ -0.53
RPSA-208	ENST00000487876	CBLC	Q9ULV8	474 aa		11.76	□□□□□ -0.53
RPSA-208	ENST00000487876	RAP2C	Q9Y3L5	183 aa		11.76	□□□□□ -0.53
RPSA-208	ENST00000487876	WIF1	Q9Y5W5	379 aa		11.76	□□□□□ -0.53
RPSA-208	ENST00000487876	POLQ	O75417	2590 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	NKX2-6	A6NCS4	301 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	FAM90A27P	A6NNH2	459 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	SCO2	O43819	266 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	WDR1	O75083	606 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	IGKV1D-16	P01601	117 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	IFI6	P09912	130 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	ACP2	P11117	423 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	PRPS2	P11908	318 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	GRK2	P25098	689 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	GABRA3	P34903	492 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	EVI2B	P34910	448 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	ADH7	P40394	386 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	MAP3K8	P41279	467 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	RPL14	P50914	215 aa	Known RBP	11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	MAGOH	P61326	146 aa	Known RBP	11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	PSPH	P78330	225 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	STX3	Q13277	289 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	ZNHIT3	Q15649	155 aa	Predicted RBP	11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	DECR1	Q16698	335 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	CYP27C1	Q4G0S4	372 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	C1orf185	Q5T7R7	199 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	HHAT	Q5VTY9	493 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	TMEM211	Q6ICI0	200 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	B3GNT6	Q6ZMB0	384 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	HOMEZ	Q8IX15	550 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	RIMKLA	Q8IXN7	391 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	ULK2	Q8IYT8	1036 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	NUP43	Q8NFH3	380 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	CA5BP1	Q8WTZ4	195 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	RND1	Q92730	232 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	HOXB13	Q92826	284 aa	Predicted RBP	11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	TLCD1	Q96CP7	247 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	FAM120B	Q96EK7	910 aa	Known RBP	11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	RMND5B	Q96G75	393 aa	Predicted RBP	11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	C16orf58	Q96GQ5	468 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	MS4A4E	Q96PG1	132 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	TIMP4	Q99727	224 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	YIPF4	Q9BSR8	244 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	UGT2B28	Q9BY64	529 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	NUF2	Q9BZD4	464 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	UCK2	Q9BZX2	261 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	AKTIP	Q9H8T0	292 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	TMBIM4	Q9HC24	238 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876		Q9N2J8	555 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	COQ3	Q9NZJ6	369 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876	HAO1	Q9UJM8	370 aa		11.75	□□□□□ -0.53
RPSA-208	ENST00000487876		A0A1W2PRB8	838 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	FADS1	O60427	444 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	IL33	O95760	270 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	HOXB1	P14653	301 aa	Predicted RBP	11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	BMP7	P18075	431 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	TCEA1	P23193	301 aa	Known RBP	11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	KIR3DL1	P43629	444 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	DIO3	P55073	304 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	MRPS22	P82650	360 aa	Known RBP	11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	EMX2	Q04743	252 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	STX5	Q13190	355 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	CPTP	Q5TA50	214 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	VASN	Q6EMK4	673 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	MFSD12	Q6NUT3	480 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	SEM1	Q6ZVN7	128 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	ACAD11	Q709F0	780 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	PLCZ1	Q86YW0	608 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	SLC16A11	Q8NCK7	471 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	OR10Q1	Q8NGQ4	319 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	OR14L1P	Q8NHC6	308 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	GPR151	Q8TDV0	419 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	SLC9A6	Q92581	669 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	HS3ST6	Q96QI5	342 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	OR2B2	Q9GZK3	357 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	CXorf36	Q9H7Y0	433 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	CHST11	Q9NPF2	352 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	NTM	Q9P121	344 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	EIF3L	Q9Y262	564 aa	Known RBP	11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	PDZD2	O15018	2839 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876	MYO9A	B2RTY4	2548 aa		11.74	□□□□□ -0.53
RPSA-208	ENST00000487876		A0A0G2JNJ9	132 aa		11.73	□□□□□ -0.53
RPSA-208	ENST00000487876	HNRNPR	O43390	633 aa	Known RBP	11.73	□□□□□ -0.53
RPSA-208	ENST00000487876	EMC8	O43402	210 aa		11.73	□□□□□ -0.53
RPSA-208	ENST00000487876	CBR3	O75828	277 aa		11.73	□□□□□ -0.53
RPSA-208	ENST00000487876	NKX2-2	O95096	273 aa		11.73	□□□□□ -0.53
RPSA-208	ENST00000487876	C6orf47	O95873	294 aa		11.73	□□□□□ -0.53
RPSA-208	ENST00000487876	PRPS1L1	P21108	318 aa		11.73	□□□□□ -0.53
RPSA-208	ENST00000487876	CHRNB4	P30926	498 aa		11.73	□□□□□ -0.53
RPSA-208	ENST00000487876	RPL3	P39023	403 aa	Known RBP	11.73	□□□□□ -0.53
RPSA-208	ENST00000487876	CASP8	Q14790	479 aa		11.73	□□□□□ -0.53
RPSA-208	ENST00000487876	MLC1	Q15049	377 aa		11.73	□□□□□ -0.53
RPSA-208	ENST00000487876	DUSP5	Q16690	384 aa		11.73	□□□□□ -0.53
RPSA-208	ENST00000487876	GRAMD1B	Q3KR37	738 aa		11.73	□□□□□ -0.53
RPSA-208	ENST00000487876	ACSF3	Q4G176	576 aa	Predicted RBP	11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms