RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 G6PC3Q9BUM1 346 aa17.81■□□□□ 0.44
PCOLCE-208ENST00000487172 MFRPQ9BY79 579 aa17.81■□□□□ 0.44
PCOLCE-208ENST00000487172 SACM1LQ9NTJ5 587 aa17.81■□□□□ 0.44
PCOLCE-208ENST00000487172 KLF13Q9Y2Y9 288 aaPredicted RBP17.81■□□□□ 0.44
PCOLCE-208ENST00000487172 KCNE3Q9Y6H6 103 aa17.81■□□□□ 0.44
PCOLCE-208ENST00000487172 HMGN4O00479 90 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 MRASO14807 208 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 BMP2P12643 396 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 CNR1P21554 472 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 RGNQ15493 299 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 ARHGAP11BQ3KRB8 267 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 TBCELQ5QJ74 424 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 COX20Q5RI15 118 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 AP1ARQ63HQ0 302 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 FBXW8Q8N3Y1 598 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 POU5F2Q8N7G0 328 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 PNPT1Q8TCS8 783 aaKnown RBP17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 RNF138Q8WVD3 245 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 XAGE5Q8WWM1 108 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 EFHD2Q96C19 240 aaPredicted RBP17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 NTNG2Q96CW9 530 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 LRRC58Q96CX6 371 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 GID8Q9NWU2 228 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 THUMPD1Q9NXG2 353 aaKnown RBP17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 ANAPC2Q9UJX6 822 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 CNOT11Q9UKZ1 510 aaKnown RBP17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 CORO2BQ9UQ03 480 aa17.8■□□□□ 0.44
PCOLCE-208ENST00000487172 EVPLLA8MZ36 301 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 IGKV1D-16P01601 117 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 P04436 131 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 CCL3P10147 92 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 CYP4B1P13584 511 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 GPX2P18283 190 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 CASP9P55211 416 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 INAQ16352 499 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 DCST2Q5T1A1 773 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 ATAD3BQ5T9A4 648 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 GALNTL5Q7Z4T8 443 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 PTRH1Q86Y79 214 aaKnown RBP17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 FITM2Q8N6M3 262 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 Q8NA96 180 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 ROPN1LQ96C74 230 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 NODALQ96S42 347 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 SDF2Q99470 211 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 HES7Q9BYE0 225 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 EFCAB1Q9HAE3 211 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 LIPT1Q9Y234 373 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 PCDHGA10Q9Y5H3 936 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 ITPR1Q14643 2758 aa17.79■□□□□ 0.44
PCOLCE-208ENST00000487172 KLRC4-KLRK1H3BQV0 150 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 FXYD1O00168 92 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 HS6ST1O60243 411 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 SORBS2O94875 1100 aaKnown RBP17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 CASP3P42574 277 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 CRATP43155 626 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 SNTA1Q13424 505 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 KRT72Q14CN4 511 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 SOWAHCQ53LP3 525 aaPredicted RBP17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 DESI1Q6ICB0 168 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 FIGNL1Q6PIW4 674 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 HACD2Q6Y1H2 254 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 SULF2Q8IWU5 870 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 OR5M3Q8NGP4 307 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 RAB8BQ92930 207 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 RCN3Q96D15 328 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 CPPED1Q9BRF8 314 aaPredicted RBP17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 ANGPTL4Q9BY76 406 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 IL1RL2Q9HB29 575 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 PROK2Q9HC23 129 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 KLHL1Q9NR64 748 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 FBXO34Q9NWN3 711 aa17.78■□□□□ 0.44
PCOLCE-208ENST00000487172 EML6Q6ZMW3 1958 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 PRAMEF27A3QJZ7 478 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 TNFRSF21O75509 655 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 STX11O75558 287 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 NGFRP08138 427 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 ETFAP13804 333 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 DSTNP60981 165 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 NFATC3Q12968 1075 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 CCNJQ5T5M9 372 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 NANOGP8Q6NSW7 305 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 SLC30A6Q6NXT4 461 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 C16orf62Q7Z3J2 963 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 FAM98AQ8NCA5 519 aaKnown RBP17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 OR8J3Q8NGG0 315 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 SH3GL1Q99961 368 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 ZNF350Q9GZX5 532 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 IKZF5Q9H5V7 419 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 NANOGQ9H9S0 305 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 POLE3Q9NRF9 147 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 DEPPQ9NTK1 212 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 ABCG2Q9UNQ0 655 aa17.77■□□□□ 0.44
PCOLCE-208ENST00000487172 AIM2O14862 343 aa17.76■□□□□ 0.43
PCOLCE-208ENST00000487172 PEX1O43933 1283 aa17.76■□□□□ 0.43
PCOLCE-208ENST00000487172 FADS1O60427 444 aa17.76■□□□□ 0.43
PCOLCE-208ENST00000487172 ICOSLGO75144 302 aa17.76■□□□□ 0.43
PCOLCE-208ENST00000487172 SNX4O95219 450 aa17.76■□□□□ 0.43
PCOLCE-208ENST00000487172 RASAL1O95294 804 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms