RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 KLF4O43474 513 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 CH25HO95992 272 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 FPR3P25089 353 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 RFX2P48378 723 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 ITPRIPL2Q3MIP1 535 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 GLYR1Q49A26 553 aaPredicted RBP11.53□□□□□ -0.56
PTCD2-204ENST00000486995 AADACL4Q5VUY2 407 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 AGAP6Q5VW22 663 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 MFSD12Q6NUT3 480 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 SLC30A6Q6NXT4 461 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 FBXO42Q6P3S6 717 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 PARM1Q6UWI2 310 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 MTSS1LQ765P7 747 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 GDF7Q7Z4P5 450 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 FAM181AQ8N9Y4 354 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 ACOT11Q8WXI4 607 aaPredicted RBP11.53□□□□□ -0.56
PTCD2-204ENST00000486995 FGF14Q92915 247 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 C1GALT1C1Q96EU7 318 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 KCTD7Q96MP8 289 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 AGAP4Q96P64 663 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 NEDD4LQ96PU5 975 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 OR2M4Q96R27 311 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 HOXD1Q9GZZ0 328 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 WBP1LQ9NX94 342 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 IL20Q9NYY1 176 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 KCMF1Q9P0J7 381 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 EXOSC1Q9Y3B2 195 aaKnown RBP11.53□□□□□ -0.56
PTCD2-204ENST00000486995 PCDHGB2Q9Y5G2 931 aa11.53□□□□□ -0.56
PTCD2-204ENST00000486995 ATG2BQ96BY7 2078 aa11.52□□□□□ -0.56
PTCD2-204ENST00000486995 A0A1W2PQL4 384 aaPredicted RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 HTR3EA5X5Y0 456 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 SURF4O15260 269 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 DNAJB6O75190 326 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 AZGP1P25311 298 aaKnown RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 AK4P27144 223 aaPredicted RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 STAT5AP42229 794 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 SLC9A3P48764 834 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 RGS8P57771 180 aaPredicted RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 RPS15AP62244 130 aaKnown RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 PPP2CBP62714 309 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 PPP2CAP67775 309 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 FAM214AQ32MH5 1076 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 PUS10Q3MIT2 529 aaKnown RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 CRTC2Q53ET0 693 aaPredicted RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 QSOX2Q6ZRP7 698 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 ASPGQ86U10 573 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 LHFPL3Q86UP9 236 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 NRMQ8IXM6 262 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 LRRC25Q8N386 305 aaPredicted RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 SYT14Q8NB59 555 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 POGLUT1Q8NBL1 392 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 CDS1Q92903 461 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 COL26A1Q96A83 441 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 MYADMQ96S97 322 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 MCHR1Q99705 422 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 MED18Q9BUE0 208 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 KATNB1Q9BVA0 655 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 C1QTNF7Q9BXJ2 289 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 IGFLR1Q9H665 355 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 TIGARQ9NQ88 270 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 KLHL28Q9NXS3 571 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 ZNF624Q9P2J8 865 aaPredicted RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 RANBP2P49792 3224 aaKnown RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 DUXAA6NLW8 204 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 AP3D1O14617 1153 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 LALBAP00709 142 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 IL7P13232 177 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 IFNA8P32881 189 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 SOX18P35713 384 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 GPR4P46093 362 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 CDH11P55287 796 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 CLDN2P57739 230 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 COPZ1P61923 177 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 TMEM196Q5HYL7 178 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 NXNL2Q5VZ03 156 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 TYW3Q6IPR3 259 aaKnown RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 CDC73Q6P1J9 531 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 PLEKHM3Q6ZWE6 761 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 LSRQ86X29 649 aaPredicted RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 OR4N5Q8IXE1 308 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 FLVCR1-AS1Q8TAF5 88 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 NT5CQ8TCD5 201 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 TMEM255BQ8WV15 326 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 OSTF1Q92882 214 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 UFD1Q92890 307 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 SLC41A3Q96GZ6 507 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 ZNF649Q9BS31 505 aa11.52□□□□□ -0.57
PTCD2-204ENST00000486995 MTHFD2LQ9H903 347 aaPredicted RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 ZNF443Q9Y2A4 671 aaPredicted RBP11.52□□□□□ -0.57
PTCD2-204ENST00000486995 DNAH14Q0VDD8 3507 aa11.51□□□□□ -0.57
PTCD2-204ENST00000486995 GSAPA4D1B5 854 aa11.51□□□□□ -0.57
PTCD2-204ENST00000486995 SLC30A4O14863 429 aa11.51□□□□□ -0.57
PTCD2-204ENST00000486995 PIP5K1CO60331 668 aa11.51□□□□□ -0.57
PTCD2-204ENST00000486995 GABRA5P31644 462 aa11.51□□□□□ -0.57
PTCD2-204ENST00000486995 SLC1A3P43003 542 aa11.51□□□□□ -0.57
PTCD2-204ENST00000486995 TNFRSF4P43489 277 aa11.51□□□□□ -0.57
PTCD2-204ENST00000486995 HTR3AP46098 478 aa11.51□□□□□ -0.57
PTCD2-204ENST00000486995 NKX2-5P52952 324 aaPredicted RBP11.51□□□□□ -0.57
PTCD2-204ENST00000486995 OR2B6P58173 313 aa11.51□□□□□ -0.57
PTCD2-204ENST00000486995 FABP5Q01469 135 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms