RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 BNIP3Q12983 259 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 OR8J1Q8NGP2 316 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 GNPDA2Q8TDQ7 276 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 DTNBP1Q96EV8 351 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 MCHR1Q99705 422 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 MRPS33Q9Y291 106 aaKnown RBP18.97■□□□□ 0.63
HPS3-206ENST00000486530 A0A0A6YYC8 382 aaPredicted RBP18.97■□□□□ 0.63
HPS3-206ENST00000486530 I3L1I5 382 aaPredicted RBP18.97■□□□□ 0.63
HPS3-206ENST00000486530 KIAA0513O60268 411 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 OR10H2O60403 315 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 SOX30O94993 753 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 OR5F1O95221 314 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 DBIP07108 87 aaKnown RBP18.97■□□□□ 0.63
HPS3-206ENST00000486530 CT62P0C5K7 136 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 TNNI3P19429 210 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 TRHRP34981 398 aaPredicted RBP18.97■□□□□ 0.63
HPS3-206ENST00000486530 MLLT3P42568 568 aaPredicted RBP18.97■□□□□ 0.63
HPS3-206ENST00000486530 EEF1A1P68104 462 aaKnown RBP18.97■□□□□ 0.63
HPS3-206ENST00000486530 DMWDQ09019 674 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 FAM53BQ14153 422 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 IRF3Q14653 427 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 EXOSC7Q15024 291 aaKnown RBP18.97■□□□□ 0.63
HPS3-206ENST00000486530 CCNJQ5T5M9 372 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 SLC36A4Q6YBV0 504 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 VWA5B2Q8N398 1253 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 TOR1AIP2Q8NFQ8 470 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 DOK4Q8TEW6 326 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 PMM1Q92871 262 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 ZNF285Q96NJ3 590 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 PLCL2Q9UPR0 1127 aa18.97■□□□□ 0.63
HPS3-206ENST00000486530 EML5Q05BV3 1969 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 TLCD2A6NGC4 264 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 CLDN24A6NM45 220 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 TGFBR2P37173 567 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 SLC15A1P46059 708 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 DNAH14Q0VDD8 3507 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 GPR68Q15743 365 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 DEFB133Q30KQ1 61 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 GARNL3Q5VVW2 1013 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 OGFOD3Q6PK18 319 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 ZNF730Q6ZMV8 503 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 GPR151Q8TDV0 419 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 CRELD1Q96HD1 420 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 IL4I1Q96RQ9 567 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 PRR14Q9BWN1 585 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 CDCA4Q9BXL8 241 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 SLC25A19Q9HC21 320 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 POLE3Q9NRF9 147 aa18.96■□□□□ 0.63
HPS3-206ENST00000486530 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.96■□□□□ 0.63
HPS3-206ENST00000486530 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 FOXS1O43638 330 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 ENTPD6O75354 484 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 NSA2O95478 260 aaKnown RBP18.95■□□□□ 0.62
HPS3-206ENST00000486530 ADORA3P0DMS8 318 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 CD36P16671 472 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 GABRA4P48169 554 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 PPM1FP49593 454 aaPredicted RBP18.95■□□□□ 0.62
HPS3-206ENST00000486530 MAP4K2Q12851 820 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 ZNF155Q12901 538 aaPredicted RBP18.95■□□□□ 0.62
HPS3-206ENST00000486530 DECR1Q16698 335 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 C14orf28Q4W4Y0 310 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 RRM2BQ7LG56 351 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 ZNF595Q8IYB9 648 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 PIGXQ8TBF5 258 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 ACOT11Q8WXI4 607 aaPredicted RBP18.95■□□□□ 0.62
HPS3-206ENST00000486530 PIK3R3Q92569 461 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 HOXB13Q92826 284 aaPredicted RBP18.95■□□□□ 0.62
HPS3-206ENST00000486530 GPA33Q99795 319 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 POLDIP3Q9BY77 421 aaKnown RBP18.95■□□□□ 0.62
HPS3-206ENST00000486530 POLR2J2Q9GZM3 115 aaKnown RBP18.95■□□□□ 0.62
HPS3-206ENST00000486530 CHRNA10Q9GZZ6 450 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 HCN3Q9P1Z3 774 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 SPAG17Q6Q759 2223 aa18.95■□□□□ 0.62
HPS3-206ENST00000486530 CLPXO76031 633 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 MED26O95402 600 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 CBX7O95931 251 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 EPHA4P54764 986 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 POU6F2P78424 691 aaPredicted RBP18.94■□□□□ 0.62
HPS3-206ENST00000486530 LSM11P83369 360 aaKnown RBP eCLIP18.94■□□□□ 0.62
HPS3-206ENST00000486530 TSPAN31Q12999 210 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 TIGD6Q17RP2 521 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 MAMSTRQ6ZN01 415 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 RANBP3LQ86VV4 465 aaPredicted RBP18.94■□□□□ 0.62
HPS3-206ENST00000486530 GALNT12Q8IXK2 581 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 OR6C4Q8NGE1 309 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 DNASE2BQ8WZ79 361 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 SLC41A3Q96GZ6 507 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 RAB33BQ9H082 229 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 PLGRKTQ9HBL7 147 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 SOHLH2Q9NX45 425 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 EPHA6Q9UF33 1036 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 ABCA7Q8IZY2 2146 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 HYKKA2RU49 373 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 NKX2-2O95096 273 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 NID1P14543 1247 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 ENTPD1P49961 510 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 SMSP52788 366 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 GFERP55789 205 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 HOXC5Q00444 222 aa18.94■□□□□ 0.62
HPS3-206ENST00000486530 CDK5Q00535 292 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms