RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 B3GALT5-AS1P59052 145 aa19.52■□□□□ 0.72
USP40-215ENST00000484528 PSPHP78330 225 aa19.52■□□□□ 0.72
USP40-215ENST00000484528 MRPS22P82650 360 aaKnown RBP19.52■□□□□ 0.72
USP40-215ENST00000484528 SORDQ00796 357 aa19.52■□□□□ 0.72
USP40-215ENST00000484528 DAZAP2Q15038 168 aaPredicted RBP19.52■□□□□ 0.72
USP40-215ENST00000484528 NOXRED1Q6NXP6 359 aa19.52■□□□□ 0.72
USP40-215ENST00000484528 TRIM46Q7Z4K8 759 aa19.52■□□□□ 0.72
USP40-215ENST00000484528 EPS8L3Q8TE67 593 aaKnown RBP19.52■□□□□ 0.72
USP40-215ENST00000484528 WNT2BQ93097 391 aa19.52■□□□□ 0.72
USP40-215ENST00000484528 GFM2Q969S9 779 aaKnown RBP19.52■□□□□ 0.72
USP40-215ENST00000484528 EGLN2Q96KS0 407 aa19.52■□□□□ 0.72
USP40-215ENST00000484528 AMDHD1Q96NU7 426 aa19.52■□□□□ 0.72
USP40-215ENST00000484528 FOXC2Q99958 501 aa19.52■□□□□ 0.72
USP40-215ENST00000484528 RRAGDQ9NQL2 400 aaPredicted RBP19.52■□□□□ 0.72
USP40-215ENST00000484528 GRID1Q9ULK0 1009 aa19.52■□□□□ 0.72
USP40-215ENST00000484528 C19orf53Q9UNZ5 99 aaPredicted RBP19.52■□□□□ 0.72
USP40-215ENST00000484528 FIS1Q9Y3D6 152 aa19.52■□□□□ 0.72
USP40-215ENST00000484528 ZFHX3Q15911 3703 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 RSL1D1O76021 490 aaKnown RBP19.51■□□□□ 0.71
USP40-215ENST00000484528 TGM6O95932 706 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 DNASE1P24855 282 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 GAB1Q13480 694 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 POU4F3Q15319 338 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 CCDC153Q494R4 210 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 RAET1LQ5VY80 246 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 ANKRD26P1Q6NSI1 321 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 ZNF551Q7Z340 670 aaPredicted RBP19.51■□□□□ 0.71
USP40-215ENST00000484528 C4orf33Q8N1A6 199 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 OR2M3Q8NG83 312 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 DTNBP1Q96EV8 351 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 ZFP3Q96NJ6 502 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 RTN4RQ9BZR6 473 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 CXXC4Q9H2H0 198 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 OXSMQ9NWU1 459 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 TAS2R7Q9NYW3 318 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 MED11Q9P086 117 aa19.51■□□□□ 0.71
USP40-215ENST00000484528 COPEO14579 308 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 FADS1O60427 444 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 SEC22BO75396 215 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 PSMG1O95456 288 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 CPA3P15088 417 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 HK1P19367 917 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 CHMP24386 653 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 CRHR1P34998 444 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 CCT5P48643 541 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 DSCR4P56555 118 aaPredicted RBP19.5■□□□□ 0.71
USP40-215ENST00000484528 DNAJB13P59910 316 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 HSPB3Q12988 150 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 DECR1Q16698 335 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 CYP27C1Q4G0S4 372 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 P4HA3Q7Z4N8 544 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 OR2L13Q8N349 312 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 FADS6Q8N9I5 356 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 OR5M1Q8NGP8 315 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 ELP4Q96EB1 424 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 UCN2Q96RP3 112 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 YIPF4Q9BSR8 244 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 Q9N2J8 555 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 EQTNQ9NQ60 294 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 MRPS18CQ9Y3D5 142 aaKnown RBP19.5■□□□□ 0.71
USP40-215ENST00000484528 CCL27Q9Y4X3 112 aa19.5■□□□□ 0.71
USP40-215ENST00000484528 H0YC42 278 aa19.49■□□□□ 0.71
USP40-215ENST00000484528 GMFGO60234 142 aa19.49■□□□□ 0.71
USP40-215ENST00000484528 SLITRK5O94991 958 aa19.49■□□□□ 0.71
USP40-215ENST00000484528 UROSP10746 265 aa19.49■□□□□ 0.71
USP40-215ENST00000484528 CPOXP36551 454 aa19.49■□□□□ 0.71
USP40-215ENST00000484528 TPD52P55327 224 aaPredicted RBP19.49■□□□□ 0.71
USP40-215ENST00000484528 NAA20P61599 178 aa19.49■□□□□ 0.71
USP40-215ENST00000484528 ZNHIT3Q15649 155 aaPredicted RBP19.49■□□□□ 0.71
USP40-215ENST00000484528 PAMR1Q6UXH9 720 aa19.49■□□□□ 0.71
USP40-215ENST00000484528 IKBIPQ70UQ0 350 aa19.49■□□□□ 0.71
USP40-215ENST00000484528 MARCH3Q86UD3 253 aa19.49■□□□□ 0.71
USP40-215ENST00000484528 FAM76AQ8TAV0 307 aa19.49■□□□□ 0.71
USP40-215ENST00000484528 ABCG2Q9UNQ0 655 aa19.49■□□□□ 0.71
USP40-215ENST00000484528 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 A0A1W2PNV4 684 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 GXYLT2A0PJZ3 443 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 H3BQF6 201 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 SEC14L5O43304 696 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 AKAP10O43572 662 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 HCRTR2O43614 444 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 TNFSF13O75888 250 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 CD99P14209 185 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 KIAA0040Q15053 153 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 LIPMQ5VYY2 423 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 CHMP1BQ7LBR1 199 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 C10orf107Q8IVU9 208 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 CHDHQ8NE62 594 aaPredicted RBP19.48■□□□□ 0.71
USP40-215ENST00000484528 OR2T11Q8NH01 316 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 CLHC1Q8NHS4 586 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 CIDECQ96AQ7 238 aaPredicted RBP19.48■□□□□ 0.71
USP40-215ENST00000484528 TMUB1Q9BVT8 246 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 ACBD3Q9H3P7 528 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 LRTM1Q9HBL6 345 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 PACSIN3Q9UKS6 424 aa19.48■□□□□ 0.71
USP40-215ENST00000484528 SLC22A20A6NK97 555 aa19.47■□□□□ 0.71
USP40-215ENST00000484528 H3BML4 177 aa19.47■□□□□ 0.71
USP40-215ENST00000484528 PDPK1O15530 556 aa19.47■□□□□ 0.71
USP40-215ENST00000484528 SMNDC1O75940 238 aaKnown RBP eCLIP19.47■□□□□ 0.71
USP40-215ENST00000484528 IL33O95760 270 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms