RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 MOCOSQ96EN8 888 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 CDCA5Q96FF9 252 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 ZNF419Q96HQ0 510 aaPredicted RBP4.5□□□□□ -1.69
SSBP1-211ENST00000484178 TEX37Q96LM6 180 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 TRNT1Q96Q11 434 aaKnown RBP4.5□□□□□ -1.69
SSBP1-211ENST00000484178 TEFMQ96QE5 360 aaKnown RBP4.5□□□□□ -1.69
SSBP1-211ENST00000484178 KCNA7Q96RP8 456 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 TRIB1Q96RU8 372 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 LYSMD1Q96S90 227 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 EGFL8Q99944 293 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 SLC30A2Q9BRI3 323 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 DOHHQ9BU89 302 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 MED18Q9BUE0 208 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 ALG8Q9BVK2 526 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 SLC22A4Q9H015 551 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 RIBC2Q9H4K1 309 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 ACTL8Q9H568 366 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 ISYNA1Q9NPH2 558 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 THSD1Q9NS62 852 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 BEX4Q9NWD9 120 aaPredicted RBP4.5□□□□□ -1.69
SSBP1-211ENST00000484178 CLN6Q9NWW5 311 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 IL17CQ9P0M4 197 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 ERVK-18Q9QC07 812 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 RABL2AQ9UBK7 228 aaPredicted RBP4.5□□□□□ -1.69
SSBP1-211ENST00000484178 ZNF282Q9UDV7 671 aaPredicted RBP4.5□□□□□ -1.69
SSBP1-211ENST00000484178 ZNF225Q9UK10 706 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 ZNF490Q9ULM2 529 aaPredicted RBP4.5□□□□□ -1.69
SSBP1-211ENST00000484178 RABL2BQ9UNT1 228 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 RCE1Q9Y256 329 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 MRPS17Q9Y2R5 130 aaKnown RBP4.5□□□□□ -1.69
SSBP1-211ENST00000484178 TIMM22Q9Y584 194 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 RAI2Q9Y5P3 530 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 SNX10Q9Y5X0 201 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 ARL5AQ9Y689 179 aa4.5□□□□□ -1.69
SSBP1-211ENST00000484178 IQCMA0A1B0GVH7 501 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 GAGE10A6NGK3 116 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 MBD3L5A6NJ08 208 aaPredicted RBP4.49□□□□□ -1.69
SSBP1-211ENST00000484178 FAM90A7PA6NKC0 464 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 FAM90A22PA8MWA6 464 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 FAM90A12PA8MX19 464 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 FAM90A23PA8MXZ1 464 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 CLIC1O00299 241 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 ZNF197O14709 1029 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 KMOO15229 486 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 SEC14L5O43304 696 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 SCO2O43819 266 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 MOSPD3O75425 235 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 CCNKO75909 580 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 RHOCP08134 193 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 OR56A5P0C7T3 313 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 PPP3CBP16298 524 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 HOXB9P17482 250 aaPredicted RBP4.49□□□□□ -1.69
SSBP1-211ENST00000484178 TSPAN8P19075 237 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 M6PRP20645 277 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 CYP2A7P20853 494 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 GALP22466 123 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 KELP23276 732 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 HLA-DMAP28067 261 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 HOXD9P28356 352 aaPredicted RBP4.49□□□□□ -1.69
SSBP1-211ENST00000484178 ERP29P30040 261 aaKnown RBP4.49□□□□□ -1.69
SSBP1-211ENST00000484178 PPIFP30405 207 aaKnown RBP4.49□□□□□ -1.69
SSBP1-211ENST00000484178 RRM2P31350 389 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 UQCRC1P31930 480 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 ATP5C1P36542 298 aaKnown RBP4.49□□□□□ -1.69
SSBP1-211ENST00000484178 NUDT1P36639 197 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 TGFBR2P37173 567 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 CASP3P42574 277 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 TUFMP49411 452 aaKnown RBP4.49□□□□□ -1.69
SSBP1-211ENST00000484178 RGS6P49758 472 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 RORCP51449 518 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 TPTEP56180 551 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 FAM3BP58499 235 aaPredicted RBP4.49□□□□□ -1.69
SSBP1-211ENST00000484178 GNG2P59768 71 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 MAXP61244 160 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 SNRPGP62308 76 aaKnown RBP4.49□□□□□ -1.69
SSBP1-211ENST00000484178 RPP38P78345 283 aaKnown RBP4.49□□□□□ -1.69
SSBP1-211ENST00000484178 MGAT3Q09327 533 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 GPR17Q13304 367 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 ASAH1Q13510 395 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 TDGQ13569 410 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 IRF3Q14653 427 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 ABRAXAS2Q15018 415 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 NCF4Q15080 339 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 ZFP69Q49AA0 526 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 IFI44LQ53G44 452 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 SPIN4Q56A73 249 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 SPANXN4Q5MJ08 99 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 CTSL3PQ5NE16 218 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 C10orf120Q5SQS8 335 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 SLC25A30Q5SVS4 291 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 MPP7Q5T2T1 576 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 GPRC6AQ5T6X5 926 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 ARMC12Q5T9G4 340 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 RSBN1Q5VWQ0 802 aaPredicted RBP4.49□□□□□ -1.69
SSBP1-211ENST00000484178 MORN5Q5VZ52 161 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 ZNF626Q68DY1 528 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 LAIR2Q6ISS4 152 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 CES5AQ6NT32 575 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 PLBD1Q6P4A8 553 aa4.49□□□□□ -1.69
SSBP1-211ENST00000484178 TRIM40Q6P9F5 258 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms