RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 GP1BAP07359 652 aa24.4■■□□□ 1.5
SHOX2-204ENST00000483851 HBQ1P09105 142 aa24.4■■□□□ 1.5
SHOX2-204ENST00000483851 RPS4Y1P22090 263 aaKnown RBP24.4■■□□□ 1.5
SHOX2-204ENST00000483851 ZNF267Q14586 743 aaPredicted RBP24.4■■□□□ 1.5
SHOX2-204ENST00000483851 CTU2Q2VPK5 515 aaKnown RBP24.4■■□□□ 1.5
SHOX2-204ENST00000483851 EIPR1Q53HC9 387 aa24.4■■□□□ 1.5
SHOX2-204ENST00000483851 ARHGAP40Q5TG30 622 aa24.4■■□□□ 1.5
SHOX2-204ENST00000483851 OR4D11Q8NGI4 311 aa24.4■■□□□ 1.5
SHOX2-204ENST00000483851 ISOC1Q96CN7 298 aa24.4■■□□□ 1.5
SHOX2-204ENST00000483851 VSTM2LQ96N03 204 aa24.4■■□□□ 1.5
SHOX2-204ENST00000483851 ALPK1Q96QP1 1244 aa24.4■■□□□ 1.5
SHOX2-204ENST00000483851 PRODH2Q9UF12 536 aa24.4■■□□□ 1.5
SHOX2-204ENST00000483851 NINQ8N4C6 2090 aa24.4■■□□□ 1.5
SHOX2-204ENST00000483851 CCNB2O95067 398 aa24.39■■□□□ 1.5
SHOX2-204ENST00000483851 IFNA16P05015 189 aa24.39■■□□□ 1.5
SHOX2-204ENST00000483851 DBIP07108 87 aaKnown RBP24.39■■□□□ 1.5
SHOX2-204ENST00000483851 H1F0P07305 194 aaKnown RBP24.39■■□□□ 1.5
SHOX2-204ENST00000483851 GABRA3P34903 492 aa24.39■■□□□ 1.5
SHOX2-204ENST00000483851 RYKP34925 604 aa24.39■■□□□ 1.5
SHOX2-204ENST00000483851 CD47Q08722 323 aa24.39■■□□□ 1.5
SHOX2-204ENST00000483851 KEAP1Q14145 624 aa24.39■■□□□ 1.5
SHOX2-204ENST00000483851 RAB39AQ14964 217 aa24.39■■□□□ 1.5
SHOX2-204ENST00000483851 ZC3H14Q6PJT7 736 aaKnown RBP24.39■■□□□ 1.5
SHOX2-204ENST00000483851 CLVS1Q8IUQ0 354 aaPredicted RBP24.39■■□□□ 1.5
SHOX2-204ENST00000483851 SLITRK4Q8IW52 837 aa24.39■■□□□ 1.5
SHOX2-204ENST00000483851 TAGAPQ8N103 731 aa24.39■■□□□ 1.5
SHOX2-204ENST00000483851 VANGL1Q8TAA9 524 aaPredicted RBP24.39■■□□□ 1.5
SHOX2-204ENST00000483851 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.39■■□□□ 1.5
SHOX2-204ENST00000483851 TGIF2Q9GZN2 237 aa24.39■■□□□ 1.5
SHOX2-204ENST00000483851 SIDT1Q9NXL6 827 aaKnown RBP24.39■■□□□ 1.5
SHOX2-204ENST00000483851 ENOPH1Q9UHY7 261 aa24.39■■□□□ 1.5
SHOX2-204ENST00000483851 MKLN1Q9UL63 735 aa24.39■■□□□ 1.5
SHOX2-204ENST00000483851 TMCC3Q9ULS5 477 aa24.39■■□□□ 1.5
SHOX2-204ENST00000483851 USP34Q70CQ2 3546 aa24.39■■□□□ 1.49
SHOX2-204ENST00000483851 KIAA0513O60268 411 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 BRINP1O60477 761 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 DCKP27707 260 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 RORAP35398 523 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 PSG6Q00889 435 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 PLA2G2CQ5R387 149 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 PRAMEF17Q5VTA0 474 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 DEF8Q6ZN54 512 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 VRK2Q86Y07 508 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 LINC00471Q8N535 108 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 ZNF420Q8TAQ5 688 aaPredicted RBP24.38■■□□□ 1.49
SHOX2-204ENST00000483851 DOK4Q8TEW6 326 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 ZG16BQ96DA0 208 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 PRRC1Q96M27 445 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 OR6C1Q96RD1 312 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 FEVQ99581 238 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 SH3GL3Q99963 347 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 SLC7A5P2Q9GIP4 190 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 QRSL1Q9H0R6 528 aaKnown RBP24.38■■□□□ 1.49
SHOX2-204ENST00000483851 A4GNTQ9UNA3 340 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 ZNF443Q9Y2A4 671 aaPredicted RBP24.38■■□□□ 1.49
SHOX2-204ENST00000483851 POFUT2Q9Y2G5 429 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 HSPE1-MOB4S4R3N1 261 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 VCANP13611 3396 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 A0A1W2PRQ8 180 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 TRIM64BA6NI03 449 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 SEMA7AO75326 666 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 IL7RP16871 459 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 NUBP1P53384 320 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 GABARAPL2P60520 117 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 DGCR6Q14129 220 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 GANABQ14697 944 aaKnown RBP24.38■■□□□ 1.49
SHOX2-204ENST00000483851 COMTD1Q86VU5 262 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 OR6T1Q8NGN1 323 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 OR52J3Q8NH60 311 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 GABARAPL3Q9BY60 117 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 OR10A5Q9H207 317 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 SYNDIG1Q9H7V2 258 aa24.38■■□□□ 1.49
SHOX2-204ENST00000483851 D6RAR5 112 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 M0R3H8 397 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 ONECUT2O95948 504 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 TNNI3P19429 210 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 SSTR4P31391 388 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 TRHRP34981 398 aaPredicted RBP24.37■■□□□ 1.49
SHOX2-204ENST00000483851 RHAGQ02094 409 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 MEP1AQ16819 746 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 BROXQ5VW32 411 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 LACC1Q8IV20 430 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 SLC5A8Q8N695 610 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 ZNF615Q8N8J6 731 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 SETD9Q8NE22 299 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 PIK3R3Q92569 461 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 CNPPD1Q9BV87 410 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 ZNF556Q9HAH1 456 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 ERVK-19Q9WJR5 959 aa24.37■■□□□ 1.49
SHOX2-204ENST00000483851 COL5A1P20908 1838 aaPredicted RBP24.37■■□□□ 1.49
SHOX2-204ENST00000483851 IGLV3-12A0A075B6K2 115 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 TCRBV16S1A1N1A0A5B0 115 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 E9PQ18 207 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 FAAHO00519 579 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 FLRT2O43155 660 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 ABCB7O75027 752 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 MITFO75030 526 aaPredicted RBP24.36■■□□□ 1.49
SHOX2-204ENST00000483851 UGT2B17O75795 530 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 ACP1P24666 158 aa24.36■■□□□ 1.49
SHOX2-204ENST00000483851 IFNA8P32881 189 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms