RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 HSD11B2P80365 405 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 MAT1AQ00266 395 aaKnown RBP12.32□□□□□ -0.44
CPNE1-225ENST00000483495 ST3GAL3Q11203 375 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 FOXD4Q12950 439 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-225ENST00000483495 TRAM2Q15035 370 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 SLX4IPQ5VYV7 408 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 PLXDC1Q8IUK5 500 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 NLGN4XQ8N0W4 816 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 SVOPQ8N4V2 548 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 GPR151Q8TDV0 419 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 PIK3R3Q92569 461 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 RIT1Q92963 219 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 SLC38A4Q969I6 547 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 MMABQ96EY8 250 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-225ENST00000483495 RBM18Q96H35 190 aaKnown RBP12.32□□□□□ -0.44
CPNE1-225ENST00000483495 COG8Q96MW5 612 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 ALOXE3Q9BYJ1 711 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 RBCK1Q9BYM8 510 aa12.32□□□□□ -0.44
CPNE1-225ENST00000483495 TMEM184BQ9Y519 407 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-225ENST00000483495 MN1Q10571 1320 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-225ENST00000483495 A0A087WUU8 490 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 CENPVL1A0A0U1RR11 272 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 SH3D21A4FU49 640 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 CLCA1A8K7I4 914 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 ZNF99A8MXY4 864 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 FRS3O43559 492 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 BRINP1O60477 761 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 OR5F1O95221 314 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 CCNYL3P0C7X3 344 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 MSL3P1P0C860 447 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 NID1P14543 1247 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 IFNA8P32881 189 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 GALNSP34059 522 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 GABRA3P34903 492 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 CNR2P34972 360 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 STT3AP46977 705 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 GCGRP47871 477 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 MASP1P48740 699 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 ARRB1P49407 418 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 PPM1FP49593 454 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 EMDP50402 254 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 GP2P55259 537 aaKnown RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 RGS8P57771 180 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 POU6F2P78424 691 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 STX4Q12846 297 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 BIKQ13323 160 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 MAPK14Q16539 360 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 ENTPD8Q5MY95 495 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 SYT6Q5T7P8 510 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 TMEM236Q5W0B7 351 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 LYSMD4Q5XG99 296 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 CWF19L1Q69YN2 538 aaKnown RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 C12orf73Q69YU5 71 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 TSSK4Q6SA08 328 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 WDR5BQ86VZ2 330 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 TOR1AIP2Q8NFQ8 470 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 ZNF578Q96N58 590 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 POLR2J2Q9GZM3 115 aaKnown RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 NAA50Q9GZZ1 169 aaKnown RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 PRMT8Q9NR22 394 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 SEMA4GQ9NTN9 838 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 KCNE5Q9UJ90 142 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 THADAQ6YHU6 1953 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 AP3D1O14617 1153 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 INMTO95050 263 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 GSTM3P21266 225 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 CD1CP29017 333 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 CSF2RBP32927 897 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 ZNF136P52737 540 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 SNRPGP62308 76 aaKnown RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 BTG2P78543 158 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 PSG6Q00889 435 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 ZNF155Q12901 538 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 DYNC1I2Q13409 638 aaKnown RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 GPR68Q15743 365 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 SYT16Q17RD7 645 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 PMS2CLQ68D20 193 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 WDR74Q6RFH5 385 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 AHSA2Q719I0 299 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 PRSS42Q7Z5A4 293 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 D2HGDHQ8N465 521 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 OR51Q1Q8NH59 317 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 RAB2BQ8WUD1 216 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 GGHQ92820 318 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 MVB12AQ96EY5 273 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 SLC41A2Q96JW4 573 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 VSTM2LQ96N03 204 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 MCHR1Q99705 422 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 GPA33Q99795 319 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 PRR14Q9BWN1 585 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 EVA1AQ9H8M9 152 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 LIN28AQ9H9Z2 209 aaKnown RBP12.31□□□□□ -0.44
CPNE1-225ENST00000483495 FOLH1BQ9HBA9 442 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 ACOT13Q9NPJ3 140 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 CTPS2Q9NRF8 586 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 FBXO34Q9NWN3 711 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 IRAK4Q9NWZ3 460 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 KLHL3Q9UH77 587 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 SLC6A14Q9UN76 642 aa12.31□□□□□ -0.44
CPNE1-225ENST00000483495 NINQ8N4C6 2090 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms